(Q26998736)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

title

The role of variable DNA tandem repeats in bacterial adaptation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Chris W Michiels

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

author name string

Kai Zhou

series ordinal

1

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

language of work or name

1 reference

28 August 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

FEMS Microbiology Reviews

7 March 2020

published in

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

38

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

issue

1

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

page(s)

119-141

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

DNA sequences shaped by selection for stability

7 March 2020

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Multilocus variable-number tandem repeat analysis as a molecular tool for subtyping and phylogenetic analysis of bacterial pathogens

21 January 2018

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Serial isolates of persistent Haemophilus influenzae in patients with chronic obstructive pulmonary disease express diminishing quantities of the HMW1 and HMW2 adhesins

21 January 2018

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Characterization of mononucleotide repeats in sequenced prokaryotic genomes.

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21 January 2018

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21 January 2018

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Identification of the functional initiation codons of a phase-variable gene of Haemophilus influenzae, lic2A, with the potential for differential expression

21 January 2018

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Prevalence of the hifBC, hmw1A, hmw2A, hmwC, and hia Genes in Haemophilus influenzae Isolates

21 January 2018

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Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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DNA repeats identify novel virulence genes in Haemophilus influenzae

21 January 2018

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More than one tandem repeat domain of the extracellular adherence protein of Staphylococcus aureus is required for aggregation, adherence, and host cell invasion but not for leukocyte activation

21 January 2018

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Helicobacter pylori adhesin binding fucosylated histo-blood group antigens revealed by retagging

21 January 2018

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Unstable microsatellite repeats facilitate rapid evolution of coding and regulatory sequences.

21 January 2018

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21 January 2018

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Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host

21 January 2018

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Characterization of hgpA, a gene encoding a haemoglobin/haemoglobin-haptoglobin-binding protein of Haemophilus influenzae.

21 January 2018

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Bacterial hypermutation: clinical implications

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Characterization of a Listeria monocytogenes Scott A isolate with high tolerance towards high hydrostatic pressure

21 January 2018

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The CtsR regulator of Listeria monocytogenes contains a variant glycine repeat region that affects piezotolerance, stress resistance, motility and virulence.

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID, XVI. OLIGONUCLEOTIDES AS TEMPLATES AND THE MECHANISM OF THEIR REPLICATION

21 January 2018

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Pathogenesis of Helicobacter pylori infection

21 January 2018

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The UspA1 protein and a second type of UspA2 protein mediate adherence of Moraxella catarrhalis to human epithelial cells in vitro

21 January 2018

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Expression of the Moraxella catarrhalis UspA1 protein undergoes phase variation and is regulated at the transcriptional level

21 January 2018

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The relationship between microsatellite slippage mutation rate and the number of repeat units

21 January 2018

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Role of a short tandem leucine/arginine repeat in strong mutator phenotype acquisition in a clinical isolate of Salmonella Typhimurium

21 January 2018

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Detecting microsatellites within genomes: significant variation among algorithms

21 January 2018

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Sequence-based estimation of minisatellite and microsatellite repeat variability

21 January 2018

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TolA: a membrane protein involved in colicin uptake contains an extended helical region

21 January 2018

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Phase variation of HpuAB and HmbR, two distinct haemoglobin receptors of Neisseria meningitidis DNM2.

21 January 2018

1 reference

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Review of tandem repeat search tools: a systematic approach to evaluating algorithmic performance

21 January 2018

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Evolutionary pressures on simple sequence repeats in prokaryotic coding regions

21 January 2018

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A contingency locus in prfA in a Listeria monocytogenes subgroup allows reactivation of the PrfA virulence regulator during infection in mice

21 January 2018

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Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria.

21 January 2018

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Genotyping of selected bacterial enteropathogens in Norway.

21 January 2018

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GAA trinucleotide repeat region regulates M9/pMGA gene expression in Mycoplasma gallisepticum.

21 January 2018

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Complex minisatellite rearrangements generated in the total or partial absence of Rad27/hFEN1 activity occur in a single generation and are Rad51 and Rad52 dependent.

21 January 2018

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Phenotypic switching of variable surface lipoproteins in Mycoplasma bovis involves high-frequency chromosomal rearrangements

21 January 2018

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Helicobacter pylori SabA adhesin in persistent infection and chronic inflammation

21 January 2018

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TAL effectors: function, structure, engineering and applications

21 January 2018

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Mutations arising during repair of chromosome breaks

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6976.12036

Microsatellite instability regulates transcription factor binding and gene expression

21 January 2018

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Environmental regulation of mutation rates at specific sites.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6976.12036

Detecting short tandem repeats from genome data: opening the software black box.

21 January 2018

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A novel phase variation mechanism in the meningococcus driven by a ligand-responsive repressor and differential spacing of distal promoter elements

21 January 2018

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Cholera toxin transcriptional activator toxR is a transmembrane DNA binding protein.

21 January 2018

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Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors

21 January 2018

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O-acetyltransferase gene neuO is segregated according to phylogenetic background and contributes to environmental desiccation resistance in Escherichia coli K1.

21 January 2018

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A simple cipher governs DNA recognition by TAL effectors

21 January 2018

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Adaptive evolution of highly mutable loci in pathogenic bacteria

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6976.12036

Bacterial contingency loci: the role of simple sequence DNA repeats in bacterial adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Analysis of distribution indicates diverse functions of simple sequence repeats in Mycoplasma genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Simple sequence repeats in prokaryotic genomes

21 January 2018

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IMEx: Imperfect Microsatellite Extractor.

21 January 2018

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21 January 2018

Tell me a tale of TALEs

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Phase variation of gonococcal protein II: regulation of gene expression by slipped-strand mispairing of a repetitive DNA sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

An enzymatic ruler modulates Lewis antigen glycosylation of Helicobacter pylori LPS during persistent infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Lipopolysaccharide diversity evolving in Helicobacter pylori communities through genetic modifications in fucosyltransferases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Broad conditions favor the evolution of phase-variable loci.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The complete genome sequence of the avian pathogen Mycoplasma gallisepticum strain Rlow

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Localized reversible frameshift mutation in the flhA gene confers phase variability to flagellin gene expression in Campylobacter coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Repeat instability: mechanisms of dynamic mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Analysis of type I restriction modification systems in the Neisseriaceae: genetic organization and properties of the gene products

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Simple sequence repeats in Haemophilus influenzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Timescales of genetic and epigenetic inheritance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Unique regulation of SclB - a novel collagen-like surface protein of Streptococcus pyogenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Mini- and microsatellite expansions: the recombination connection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Comparative genomics and molecular dynamics of DNA repeats in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Conversion of a peroxiredoxin into a disulfide reductase by a triplet repeat expansion

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Over-representation of repeats in stress response genes: a strategy to increase versatility under stressful conditions?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The Vlp system of Mycoplasma hyorhinis: combinatorial expression of distinct size variant lipoproteins generating high-frequency surface antigenic variation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Characterization of a CACAG pentanucleotide repeat in Pasteurella haemolytica and its possible role in modulation of a novel type III restriction-modification system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Opa proteins and CEACAMs: pathways of immune engagement for pathogenic Neisseria

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6976.12036

Environmental tuning of mutation rates

21 January 2018

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Variable expression of the Opc outer membrane protein in Neisseria meningitidis is caused by size variation of a promoter containing poly-cytidine

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Repeat or not repeat?--Statistical validation of tandem repeat prediction in genomic sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Low abundance of Escherichia coli microsatellites is associated with an extremely low mutation rate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

TAL effectors are remote controls for gene activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The mutation rates of di-, tri- and tetranucleotide repeats in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Expression and structural diversity of the lipopolysaccharide of Haemophilus influenzae: implication in virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Complex role of hemoglobin and hemoglobin-haptoglobin binding proteins in Haemophilus influenzae virulence in the infant rat model of invasive infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

A novel epigenetic regulator associated with the hypervirulent Neisseria meningitidis clonal complex 41/44.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Spontaneously Arising mutL Mutators in Evolving Escherichia coli Populations Are the Result of Changes in Repeat Length

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Adhesive activity of the haemophilus cryptic genospecies cha autotransporter is modulated by variation in tandem Peptide repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The Neisseria meningitidis capsule is important for intracellular survival in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The phasevarion: a genetic system controlling coordinated, random switching of expression of multiple genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Phasevarions mediate random switching of gene expression in pathogenic Neisseria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The phasevarion: phase variation of type III DNA methyltransferases controls coordinated switching in multiple genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Phasevarion mediated epigenetic gene regulation in Helicobacter pylori

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Influence of the combination and phase variation status of the haemoglobin receptors HmbR and HpuAB on meningococcal virulence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Evidence for an evolutionary antagonism between Mrr and Type III modification systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Localized frameshift mutation generates selective, high-frequency phase variation of a surface lipoprotein encoded by a mycoplasma ABC transporter operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Genesis, effects and fates of repeats in prokaryotic genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Short sequence repeats in microbial pathogenesis and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Multiple mechanisms of phase variation of PorA in Neisseria meningitidis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Phase and antigenic variation in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Phase variation of H. influenzae fimbriae: transcriptional control of two divergent genes through a variable combined promoter region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Selection on the genic location of disruptive elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Genetic basis for the structural difference between Streptococcus pneumoniae serotype 15B and 15C capsular polysaccharides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

A Legionella pneumophila collagen-like protein encoded by a gene with a variable number of tandem repeats is involved in the adherence and invasion of host cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Origins of variation in the fungal cell surface

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Mobile contingency locus controlling Escherichia coli K1 polysialic acid capsule acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Spontaneous sequence duplication within an open reading frame of the pneumococcal type 3 capsule locus causes high-frequency phase variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Spontaneous sequence duplications within capsule genes cap8E and tts control phase variation in Streptococcus pneumoniae serotypes 8 and 37.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Molecular genetic basis for the variable expression of Lewis Y antigen in Helicobacter pylori: analysis of the alpha (1,2) fucosyltransferase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Advances in mechanisms of genetic instability related to hereditary neurological diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The type III effectors of Xanthomonas

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Variation of gonococcal lipooligosaccharide structure is due to alterations in poly-G tracts in lgt genes encoding glycosyl transferases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Identification and characterization of simple sequence repeats in the genomes of Shigella species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Proofreading and secondary structure processing determine the orientation dependence of CAG x CTG trinucleotide repeat instability in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Localized reversible frameshift mutation in an adhesin gene confers a phase-variable adherence phenotype in mycoplasma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Variation of intragenic tandem repeat tract of tolA modulates Escherichia coli stress tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Variability of the tandem repeat region of the Escherichia coli tolA gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

The role of fimV and the importance of its tandem repeat copy number in twitching motility, pigment production, and morphology in Legionella pneumophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Double-strand break repair can lead to high frequencies of deletions within short CAG/CTG trinucleotide repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Microsatellite instability induced by hydrogen peroxide in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6976.12036

21 January 2018

Identifiers

DOI

10.1111/1574-6976.12036

2 references

Consolidated OpenCitations Corpus – April 2017

3341515

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

3341515

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

3341515

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927439%20AND%20SRC:MED&resulttype=core&format=json