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Structural and mechanistic fundamentals for designing of cellulases
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3962180
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
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12 March 2020
title
Structural and mechanistic fundamentals for designing of cellulases
(English)
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3962180
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
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12 March 2020
author
Sandro R. Marana
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1
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Europe PubMed Central
PMCID
3962180
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
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12 March 2020
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Sandro R. Marana
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English
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publication date
16 October 2012
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3962180
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12 March 2020
published in
Computational and Structural Biotechnology Journal
2 references
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Europe PubMed Central
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3962180
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
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12 March 2020
volume
2
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Europe PubMed Central
PMCID
3962180
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12 March 2020
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e201209006
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Europe PubMed Central
PMCID
3962180
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 March 2020
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Structure of the catalytic core module of the Chaetomium thermophilum family GH6 cellobiohydrolase Cel6A
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Engineering the exo-loop of Trichoderma reesei cellobiohydrolase, Cel7A. A comparison with Phanerochaete chrysosporium Cel7D
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Structural basis for ligand binding and processivity in cellobiohydrolase Cel6A from Humicola insolens
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The active site of cellobiohydrolase Cel6A from Trichoderma reesei: the roles of aspartic acids D221 and D175
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Crystallographic evidence for substrate ring distortion and protein conformational changes during catalysis in cellobiohydrolase Ce16A from trichoderma reesei
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Structural changes of the active site tunnel of Humicola insolens cellobiohydrolase, Cel6A, upon oligosaccharide binding
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21 March 2017
High-resolution crystal structures reveal how a cellulose chain is bound in the 50 A long tunnel of cellobiohydrolase I from Trichoderma reesei
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PubMed Central
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21 March 2017
The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei
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PubMed Central
reference URL
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21 March 2017
Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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21 March 2017
Three-dimensional structure of cellobiohydrolase II from Trichoderma reesei
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PubMed Central
reference URL
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21 March 2017
Product binding varies dramatically between processive and nonprocessive cellulase enzymes
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Binding preferences, surface attachment, diffusivity, and orientation of a family 1 carbohydrate-binding module on cellulose
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Deconstruction of lignocellulosic biomass to fuels and chemicals
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28 September 2017
Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
Probing carbohydrate product expulsion from a processive cellulase with multiple absolute binding free energy methods
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PubMed Central
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28 September 2017
Cellobiohydrolase hydrolyzes crystalline cellulose on hydrophobic faces
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28 September 2017
Applications of computational science for understanding enzymatic deconstruction of cellulose
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PubMed Central
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28 September 2017
The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
High speed atomic force microscopy visualizes processive movement of Trichoderma reesei cellobiohydrolase I on crystalline cellulose
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
Modeling cellulase kinetics on lignocellulosic substrates
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
Outlook for cellulase improvement: screening and selection strategies
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PubMed Central
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28 September 2017
Structures of Phanerochaete chrysosporium Cel7D in complex with product and inhibitors
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PubMed Central
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28 September 2017
Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems.
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28 September 2017
The interaction of carbohydrate-binding modules with insoluble non-crystalline cellulose is enthalpically driven
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28 September 2017
The binding specificity and affinity determinants of family 1 and family 3 cellulose binding modules
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28 September 2017
Identification of glycan structure and glycosylation sites in cellobiohydrolase II and endoglucanases I and II from Trichoderma reesei
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PubMed Central
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28 September 2017
Imaging the enzymatic digestion of bacterial cellulose ribbons reveals the endo character of the cellobiohydrolase Cel6A from Humicola insolens and its mode of synergy with cellobiohydrolase Cel7A.
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PubMed Central
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28 September 2017
Tryptophan 272: an essential determinant of crystalline cellulose degradation by Trichoderma reesei cellobiohydrolase Cel6A.
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PubMed Central
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28 September 2017
The cellulose-binding domain of the major cellobiohydrolase of Trichoderma reesei exhibits true reversibility and a high exchange rate on crystalline cellulose
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
Identification of functionally important amino acids in the cellulose-binding domain of Trichoderma reesei cellobiohydrolase I.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 September 2017
Endo-exo synergism in cellulose hydrolysis revisited.
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PubMed Central
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31 May 2018
Pre-steady-state kinetics for hydrolysis of insoluble cellulose by cellobiohydrolase Cel7A.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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31 May 2018
Processivity of cellobiohydrolases is limited by the substrate.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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31 May 2018
The initial kinetics of hydrolysis by cellobiohydrolases I and II is consistent with a cellulose surface-erosion model.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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31 May 2018
Cellulose hydrolysis in evolving substrate morphologies III: time-scale analysis.
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28 November 2018
A mechanistic model of the enzymatic hydrolysis of cellulose
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Cellulose hydrolysis in evolving substrate morphologies I: A general modeling formalism.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Cellulose hydrolysis in evolving substrate morphologies II: Numerical results and analysis.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Inhibition of the Trichoderma reesei cellulases by cellobiose is strongly dependent on the nature of the substrate.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Factors influencing glycosylation of Trichoderma reesei cellulases. II: N-glycosylation of Cel7A core protein isolated from different strains.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
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28 November 2018
Factors influencing glycosylation of Trichoderma reesei cellulases. I: Postsecretorial changes of the O- and N-glycosylation pattern of Cel7A.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
retrieved
28 November 2018
A model explaining declining rate in hydrolysis of lignocellulose substrates with cellobiohydrolase I (cel7A) and endoglucanase I (cel7B) of Trichoderma reesei
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962180
retrieved
28 November 2018
Mechanism of initial rapid rate retardation in cellobiohydrolase catalyzed cellulose hydrolysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Traffic jams reduce hydrolytic efficiency of cellulase on cellulose surface
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Molecular-level origins of biomass recalcitrance: decrystallization free energies for four common cellulose polymorphs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The difference in affinity between two fungal cellulose-binding domains is dominated by a single amino acid substitution
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Modified glycosylation of cellobiohydrolase I from a high cellulase-producing mutant strain of Trichoderma reesei
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Enhancement of the endo-beta-1,4-glucanase activity of an exocellobiohydrolase by deletion of a surface loop
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24688647
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.5936/CSBJ.201209006
1 reference
stated in
Europe PubMed Central
PMCID
3962180
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 March 2020
PMCID
3962180
2 references
stated in
PubMed
stated in
Europe PubMed Central
PMCID
3962180
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 March 2020
PubMed ID
24688647
2 references
stated in
PubMed
stated in
Europe PubMed Central
PMCID
3962180
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24688647%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 March 2020
ResearchGate publication ID
261257695
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