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Chromosomal translocations and palindromic AT-rich repeats
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title
Chromosomal translocations and palindromic AT-rich repeats
(English)
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author
Hiroki Kurahashi
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2
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Hiroki Kurahashi
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Takema Kato
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object named as
Takema Kato
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Beverly S Emanuel
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3
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language of work or name
English
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publication date
June 2012
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published in
Current Opinion in Genetics & Development
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volume
22
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PubMed
page(s)
221-8
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PubMed
issue
3
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PubMed
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PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans
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Chromosome 22-specific low copy repeats and the 22q11.2 deletion syndrome: genomic organization and deletion endpoint analysis
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A common molecular basis for rearrangement disorders on chromosome 22q11
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21 March 2017
Site-specific reciprocal translocation, t(11;22) (q23;q11), in several unrelated families with 3:1 meiotic disjunction
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DNA secondary structure is influenced by genetic variation and alters susceptibility to de novo translocation.
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28 September 2017
Observation and prediction of recurrent human translocations mediated by NAHR between nonhomologous chromosomes
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A palindrome-mediated recurrent translocation with 3:1 meiotic nondisjunction: the t(8;22)(q24.13;q11.21).
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28 September 2017
Polymorphisms of the 22q11.2 breakpoint region influence the frequency of de novo constitutional t(11;22)s in sperm.
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28 September 2017
Paternal origin of the de novo constitutional t(11;22)(q23;q11).
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28 September 2017
Function of sperm chromatin structural elements in fertilization and development
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28 September 2017
Impaired DNA replication prompts deletions within palindromic sequences, but does not induce translocations in human cells.
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28 September 2017
Molecular mechanisms and diagnosis of chromosome 22q11.2 rearrangements
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28 September 2017
An AT-rich sequence in human common fragile site FRA16D causes fork stalling and chromosome breakage in S. cerevisiae
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Expandable DNA repeats and human disease.
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28 September 2017
A constitutional balanced t(3;8)(p14;q24.1) translocation results in disruption of the TRC8 gene and predisposition to clear cell renal cell carcinoma
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28 September 2017
Age has no effect on de novo constitutional t(11;22) translocation frequency in sperm
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28 September 2017
A palindrome-driven complex rearrangement of 22q11.2 and 8q24.1 elucidated using novel technologies
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28 September 2017
Cruciform extrusion propensity of human translocation-mediating palindromic AT-rich repeats
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28 September 2017
Meiotic recombination and spatial proximity in the etiology of the recurrent t(11;22)
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28 September 2017
Palindrome-mediated chromosomal translocations in humans
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PubMed Central
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28 September 2017
Effect of paternal age on the frequency of cytogenetic abnormalities in human spermatozoa
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28 September 2017
Palindromic AT-rich repeat in the NF1 gene is hypervariable in humans and evolutionarily conserved in primates.
1 reference
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PubMed Central
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28 September 2017
Spatial positioning; a new dimension in genome function
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28 September 2017
Cruciform DNA structure underlies the etiology for palindrome-mediated human chromosomal translocations
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PubMed Central
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28 September 2017
Spatial genome organization
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
A non-B-DNA structure at the Bcl-2 major breakpoint region is cleaved by the RAG complex
1 reference
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PubMed Central
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28 September 2017
A palindrome-mediated mechanism distinguishes translocations involving LCR-B of chromosome 22q11.2
1 reference
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PubMed Central
reference URL
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28 September 2017
The constitutional t(17;22): another translocation mediated by palindromic AT-rich repeats
1 reference
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PubMed Central
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28 September 2017
Parental origin and timing of de novo Robertsonian translocation formation
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28 September 2017
Heterozygous submicroscopic inversions involving olfactory receptor-gene clusters mediate the recurrent t(4;8)(p16;p23) translocation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
The position of t(11;22)(q23;q11) constitutional translocation breakpoint is conserved among its carriers
1 reference
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PubMed Central
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28 September 2017
AT-rich palindromes mediate the constitutional t(11;22) translocation.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
Tightly clustered 11q23 and 22q11 breakpoints permit PCR-based detection of the recurrent constitutional t(11;22).
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
Clustered 11q23 and 22q11 breakpoints and 3:1 meiotic malsegregation in multiple unrelated t(11;22) families
1 reference
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PubMed Central
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28 September 2017
Palindrome resolution and recombination in the mammalian germ line
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PubMed Central
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28 September 2017
The second case of a t(17;22) in a family with neurofibromatosis type 1: sequence analysis of the breakpoint regions
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
Der(22)t(11;22) resulting from a paternal de novo translocation, adjacent 1 segregation, and maternal heterodisomy of chromosome 22.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 September 2017
Developmental genetics of the heart
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28 September 2017
Instability of long inverted repeats within mouse transgenes
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28 September 2017
Inverted DNA repeats: a source of eukaryotic genomic instability
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PubMed Central
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28 September 2017
Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair
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PubMed Central
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28 September 2017
Regulating DNA supercoiling: sperm points the way.
1 reference
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PubMed Central
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31 May 2018
Meeting DNA palindromes head-to-head
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
Low copy repeats mediate distal chromosome 22q11.2 deletions: sequence analysis predicts breakpoint mechanisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
Genetic variation affects de novo translocation frequency.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
A 140-bp-long palindromic sequence induces double-strand breaks during meiosis in the yeast Saccharomyces cerevisiae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
Hereditary Renal-Cell Carcinoma Associated with a Chromosomal Translocation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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31 May 2018
Two different forms of palindrome resolution in the human genome: deletion or translocation.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 November 2018
The human genome-wide distribution of DNA palindromes
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 November 2018
Molecular cloning of a translocation breakpoint hotspot in 22q11.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 November 2018
Packaging paternal chromosomes with protamine.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 November 2018
Trinucleotide expansion in haploid germ cells by gap repair
1 reference
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PubMed Central
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28 November 2018
Regions of genomic instability on 22q11 and 11q23 as the etiology for the recurrent constitutional t(11;22).
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378763
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28 November 2018
Unexpectedly high rate of de novo constitutional t(11;22) translocations in sperm from normal males
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Positioned to expand
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A novel sequence-based approach to localize translocation breakpoints identifies the molecular basis of a t(4;22)
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Long AT-rich palindromes and the constitutional t(11;22) breakpoint
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Spatial proximity of translocation-prone gene loci in human lymphomas
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The Mre11 complex is required for repair of hairpin-capped double-strand breaks and prevention of chromosome rearrangements
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The t(4;8) is mediated by homologous recombination between olfactory receptor gene clusters, but other 4p16 translocations occur at random
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22402448
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.GDE.2012.02.004
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2283759
Fatcat ID
release_5ojmeqkgqzchnjy2mycramqdq4
0 references
OpenCitations bibliographic resource ID
2283759
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2283759
PMCID
3378763
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2283759
PubMed ID
22402448
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2283759
ResearchGate publication ID
221688427
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