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Single-molecule analysis of translational dynamics
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PubMed
title
Single-molecule analysis of translational dynamics
(English)
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author
Albert Tsai
object named as
A. Tsai
series ordinal
4
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author name string
A. Petrov
series ordinal
1
1 reference
stated in
Crossref
J. Chen
series ordinal
2
1 reference
stated in
Crossref
S. O'Leary
series ordinal
3
1 reference
stated in
Crossref
J. D. Puglisi
series ordinal
5
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stated in
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language of work or name
English
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stated in
PubMed
publication date
1 September 2012
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stated in
PubMed
published in
Cold Spring Harbor Perspectives in Biology
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stated in
Crossref
volume
4
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stated in
PubMed
issue
9
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stated in
PubMed
page(s)
a011551
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PubMed
cites work
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Structure of the 30S ribosomal subunit
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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution
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Structures of the bacterial ribosome at 3.5 A resolution
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Zero-Mode Waveguides for Single-Molecule Analysis at High Concentrations
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A ratchet-like inter-subunit reorganization of the ribosome during translocation
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7 April 2017
Allosteric vs. spontaneous exit-site (E-site) tRNA dissociation early in protein synthesis
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Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis
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28 September 2017
The ribosome uses two active mechanisms to unwind messenger RNA during translation
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28 September 2017
The 5'-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway.
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The ribosome-bound initiation factor 2 recruits initiator tRNA to the 30S initiation complex
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28 September 2017
Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation
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Following movement of the L1 stalk between three functional states in single ribosomes.
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28 September 2017
Irreversible chemical steps control intersubunit dynamics during translation
1 reference
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PubMed Central
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28 September 2017
Following translation by single ribosomes one codon at a time.
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PubMed Central
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28 September 2017
Identification of two distinct hybrid state intermediates on the ribosome
1 reference
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PubMed Central
reference URL
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28 September 2017
Structural basis for messenger RNA movement on the ribosome
1 reference
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PubMed Central
reference URL
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28 September 2017
Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
Translation initiation factor IF2 interacts with the 30 S ribosomal subunit via two separate binding sites
1 reference
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PubMed Central
reference URL
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28 September 2017
mRNA helicase activity of the ribosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
tRNA dynamics on the ribosome during translation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
Single-molecule fluorescence resonance energy transfer
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PubMed Central
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28 September 2017
Late events of translation initiation in bacteria: a kinetic analysis
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28 September 2017
The C-terminal subdomain (IF2 C-2) contains the entire fMet-tRNA binding site of initiation factor IF2.
1 reference
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PubMed Central
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28 September 2017
Ribosome-initiator tRNA complex as an intermediate in translation initiation in Escherichia coli revealed by use of mutant initiator tRNAs and specialized ribosomes.
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28 September 2017
A complex between initiation factor IF2, guanosine triphosphate, and fMet-tRNA: an intermediate in initiation complex formation
1 reference
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PubMed Central
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28 September 2017
Macromolecular Composition During Steady-State Growth of Escherichia coli B/r
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28 September 2017
Release of polypeptide chain initiation factor IF-2 during initiation complex formation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
Manipulation of intracellular magnesium content in polymyxin B nonapeptide-sensitized Escherichia coli by ionophore A23187.
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PubMed Central
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28 September 2017
Interaction of bacterial initiation factor 2 with initiator tRNA.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
Specific interaction of initiation factor IF2 of E. coli with formylmethionyl-tRNAfMet
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
Proofreading of the codon-anticodon interaction on ribosomes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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28 September 2017
GTP hydrolysis by IF2 guides progression of the ribosome into elongation
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PubMed Central
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28 September 2017
Heterogeneous pathways and timing of factor departure during translation initiation
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31 May 2018
Nonfluorescent quenchers to correlate single-molecule conformational and compositional dynamics
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31 May 2018
Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy
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31 May 2018
Following the intersubunit conformation of the ribosome during translation in real time
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3428772
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31 May 2018
Real-time tRNA transit on single translating ribosomes at codon resolution
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31 May 2018
Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome
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PubMed Central
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31 May 2018
How initiation factors tune the rate of initiation of protein synthesis in bacteria
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31 May 2018
Is there proofreading during polypeptide synthesis?
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31 May 2018
Differential rate of ribosomal protein synthesis in Escherichia coli B/r
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31 May 2018
Specific binding of Excherichia coli chain Initiation factor 2 to fMet-tRnafMet
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31 May 2018
Effect of the amino acid attached to Escherichia coli initiator tRNA on its affinity for the initiation factor IF2 and on the IF2 dependence of its binding to the ribosome.
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31 May 2018
Reconstitution of yeast translation initiation.
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28 November 2018
Peptide bond formation destabilizes Shine-Dalgarno interaction on the ribosome
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28 November 2018
Quantitative polysome analysis identifies limitations in bacterial cell-free protein synthesis
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28 November 2018
tRNA selection and kinetic proofreading in translation
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PubMed Central
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28 November 2018
Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/22798542
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/CSHPERSPECT.A011551
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PMC publication ID
3428772
1 reference
stated in
PubMed
PubMed publication ID
22798542
1 reference
stated in
PubMed
ResearchGate publication ID
229153729
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