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Viromes, not gene markers, for studying double-stranded DNA virus communities
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Europe PubMed Central
title
Viromes, not gene markers, for studying double-stranded DNA virus communities
(English)
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main subject
virology
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virome
1 reference
based on heuristic
inferred from title
author name string
Matthew B. Sullivan
series ordinal
1
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Crossref
language of work or name
English
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stated in
PubMed
publication date
March 2015
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stated in
PubMed
published in
Journal of Virology
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stated in
PubMed
volume
89
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stated in
PubMed
issue
5
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PubMed
page(s)
2459-61
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PubMed
cites work
Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method
1 reference
stated in
PubMed Central
reference URL
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21 March 2017
Rising to the challenge: accelerated pace of discovery transforms marine virology
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PubMed Central
reference URL
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retrieved
28 September 2017
Ribonucleotide reductases reveal novel viral diversity and predict biological and ecological features of unknown marine viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
retrieved
28 September 2017
Depth-stratified functional and taxonomic niche specialization in the 'core' and 'flexible' Pacific Ocean Virome
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
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28 September 2017
Viral tagging reveals discrete populations in Synechococcus viral genome sequence space.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
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28 September 2017
Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
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28 September 2017
Metavir 2: new tools for viral metagenome comparison and assembled virome analysis
1 reference
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PubMed Central
reference URL
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28 September 2017
Metabolic reprogramming by viruses in the sunlit and dark ocean
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PubMed Central
reference URL
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28 September 2017
Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists
1 reference
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PubMed Central
reference URL
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28 September 2017
The global virome: not as big as we thought?
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PubMed Central
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28 September 2017
Twelve previously unknown phage genera are ubiquitous in global oceans
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PubMed Central
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28 September 2017
Genome of a SAR116 bacteriophage shows the prevalence of this phage type in the oceans
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PubMed Central
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28 September 2017
The Pacific Ocean virome (POV): a marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology
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PubMed Central
reference URL
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28 September 2017
VIROME: a standard operating procedure for analysis of viral metagenome sequences.
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PubMed Central
reference URL
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28 September 2017
Abundant SAR11 viruses in the ocean.
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PubMed Central
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28 September 2017
Ocean viruses: rigorously evaluating the metagenomic sample-to-sequence pipeline.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
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28 September 2017
Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
retrieved
28 September 2017
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
retrieved
28 September 2017
Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
retrieved
31 May 2018
Sulfur oxidation genes in diverse deep-sea viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4325738
retrieved
31 May 2018
Identifiers
DOI
10.1128/JVI.03289-14
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2767942
OpenCitations bibliographic resource ID
2767942
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2767942
PMC publication ID
4325738
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2767942
PubMed publication ID
25540374
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2767942
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