(Q27304341)

26 June 2017

title

Zerone: a ChIP-seq discretizer for multiple replicates with built-in quality control (English)

1 reference

26 June 2017

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Guillaume J Filion

2

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author name string

Pol Cuscó

series ordinal

1

1 reference

26 June 2017

language of work or name

English

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publication date

10 June 2016

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26 June 2017

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26 June 2017

volume

32

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26 June 2017

issue

19

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26 June 2017

page(s)

2896-2902

1 reference

Creative Commons Attribution 4.0 International

26 June 2017

copyright license

start time

26 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Model-based analysis of ChIP-Seq (MACS)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

The GEM mapper: fast, accurate and versatile alignment by filtration

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

21 March 2017

1 reference

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MEME SUITE: tools for motif discovery and searching

21 March 2017

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Genome-wide map of nucleosome acetylation and methylation in yeast

7 April 2017

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The UCSC Table Browser data retrieval tool

7 April 2017

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Widespread misinterpretable ChIP-seq bias in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

Histone modifications for human epigenome analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

FIMO: scanning for occurrences of a given motif

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5039920

BayesPeak: Bayesian analysis of ChIP-seq data

28 September 2017

1 reference

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Statistical Inference for Probabilistic Functions of Finite State Markov Chains

28 September 2017

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JAMM: a peak finder for joint analysis of NGS replicates

21 January 2018

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A tutorial on hidden Markov models and selected applications in speech recognition

21 January 2018

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Rapid innovation in ChIP-seq peak-calling algorithms is outdistancing benchmarking efforts

21 January 2018

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Error bounds for convolutional codes and an asymptotically optimum decoding algorithm

21 January 2018

1 reference

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10.1093/BIOINFORMATICS/BTW336

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/CuscoF16

26 June 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_a5xa6c27dvaffgbfugrvwnjosm

28 January 2021

Fatcat ID

0 references

OpenCitations bibliographic resource ID

4783071

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4783071

1 reference