(Q27324082)

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Broad phylogenomic sampling and the sister lineage of land plants

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Resolving difficult phylogenetic questions: why more sequences are not enough

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

The archaebacterial origin of eukaryotes

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Broad phylogenomic sampling improves resolution of the animal tree of life

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Tunicates and not cephalochordates are the closest living relatives of vertebrates

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

The prokaryote-eukaryote dichotomy: meanings and mythology

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A mitochondrial remnant in the microsporidian Trachipleistophora hominis

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Heterotachy, an important process of protein evolution

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Error, signal, and the placement of Ctenophora sister to all other animals

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Phylogenomics revives traditional views on deep animal relationships

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Buddenbrockia is a cnidarian worm

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evidence for a gram-positive, eubacterial root of the tree of life

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Two faces of the prokaryote concept

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A codon-based model of nucleotide substitution for protein-coding DNA sequences

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

An improved method for determining codon variability in a gene and its application to the rate of fixation of mutations in evolution

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Probabilistic models of eukaryotic evolution: time for integration

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Genome-scale phylogenetic analysis finds extensive gene transfer among fungi

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Phylotranscriptomic analysis of the origin and early diversification of land plants

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Genome networks root the tree of life between prokaryotic domains

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Improvement of molecular phylogenetic inference and the phylogeny of Bilateria

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

An improved general amino acid replacement matrix

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evidence for a clade of nematodes, arthropods and other moulting animals

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Acoelomorph flatworms are deuterostomes related to Xenoturbella

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Joint Bayesian Estimation of Alignment and Phylogeny

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evolution of a morphological novelty occurred before genome compaction in a lineage of extreme parasites.

24 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Being Aquifex aeolicus: Untangling a hyperthermophile's checkered past.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Origin of land plants using the multispecies coalescent model

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

The impact of paralogy on phylogenomic studies - a case study on annelid relationships

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Deep metazoan phylogeny: when different genes tell different stories.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Genome-scale coestimation of species and gene trees.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstruction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Site-specific time heterogeneity of the substitution process and its impact on phylogenetic inference

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Rooting the ribosomal tree of life

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Mutation-selection models of coding sequence evolution with site-heterogeneous amino acid fitness profiles

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Recovering evolutionary trees under a more realistic model of sequence evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Problems with "procaryote".

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evidence for a new root of the tree of life.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A mixed branch length model of heterotachy improves phylogenetic accuracy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

A site- and time-heterogeneous model of amino acid replacement.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Animal phylogeny: fatal attraction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Modeling compositional heterogeneity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Animal phylogeny: back to the coelomata?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Cladogenesis, coalescence and the evolution of the three domains of life

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Horizontal gene transfer and phylogenetics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Where is the root of the universal tree of life?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Origins of Prokaryotes, Eukaryotes, Mitochondria, and Chloroplasts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Archaea sister group of Bacteria? Indications from tree reconstruction artifacts in ancient phylogenies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Evolutionary distances for protein-coding sequences: modeling site-specific residue frequencies

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Fitting Discrete Probability Distributions to Evolutionary Events

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4571568

Shared signatures of parasitism and phylogenomics unite Cryptomycota and microsporidia

2 June 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Origin of land plants revisited in the light of sequence contamination and missing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Streptophyte algae and the origin of land plants revisited using heterogeneous models with three new algal chloroplast genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Higher-level metazoan relationships: recent progress and remaining questions

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Cases in which Parsimony or Compatibility Methods will be Positively Misleading

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Phylogeny of eukaryotes based on ribosomal RNA: long-branch attraction and models of sequence evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Markov-modulated Markov chains and the covarion process of molecular evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

A dirichlet process covarion mixture model and its assessments using posterior predictive discrepancy tests.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

PhyloBayes MPI: phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Computational methods for evaluating phylogenetic models of coding sequence evolution with dependence between codons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Ancient gene duplications and the root(s) of the tree of life.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

A congruent phylogenomic signal places eukaryotes within the Archaea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

The effects of model choice and mitigating bias on the ribosomal tree of life

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

The rooting of the universal tree of life is not reliable

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Empirical profile mixture models for phylogenetic reconstruction

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Rooted phylogeny of the three superkingdoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

The Green Algal Ancestry of Land Plants as Revealed by the Chloroplast Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

21 January 2018

A natural classification

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2014.0329

Limited effects of among-lineage rate variation on the phylogenetic performance of molecular markers

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26323760

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSTB.2014.0329

1 reference

release_5e2epksd2bekfhaxgn4pjffk4a

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/5e2epksd2bekfhaxgn4pjffk4a

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

1 reference

PubMed publication ID

26323760

1 reference