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Being Aquifex aeolicus: Untangling a hyperthermophile's checkered past.
scientific article published on January 2013
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3879981
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24281050%20AND%20SRC:MED&resulttype=core&format=json
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1 March 2020
title
Being Aquifex aeolicus: Untangling a hyperthermophile's checkered past
(English)
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Europe PubMed Central
PMC publication ID
3879981
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24281050%20AND%20SRC:MED&resulttype=core&format=json
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1 March 2020
main subject
Aquifex aeolicus
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Aquifex aeolicus
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author
Conor J Meehan
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2
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Europe PubMed Central
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3879981
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1 March 2020
John M Archibald
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3
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John M Archibald
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Europe PubMed Central
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3879981
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1 March 2020
author name string
Robert J M Eveleigh
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1
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Europe PubMed Central
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3879981
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1 March 2020
Robert G Beiko
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4
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3879981
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1 March 2020
publication date
1 January 2013
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Europe PubMed Central
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3879981
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1 March 2020
published in
Genome Biology and Evolution
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Europe PubMed Central
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3879981
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1 March 2020
volume
5
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1 March 2020
issue
12
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Europe PubMed Central
PMC publication ID
3879981
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1 March 2020
page(s)
2478-2497
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Europe PubMed Central
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3879981
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1 March 2020
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23 August 2017
Thermocrinis ruber gen. nov., sp. nov., A pink-filament-forming hyperthermophilic bacterium isolated from yellowstone national park
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
A genomic perspective on protein families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
Arrangement and nucleotide sequence of the gene (fus) encoding elongation factor G (EF-G) from the hyperthermophilic bacterium Aquifex pyrophilus: phylogenetic depth of hyperthermophilic bacteria inferred from analysis of the EF-G/fus sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
The superfamily of heme-copper respiratory oxidases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
Proteins from thermophilic microorganisms
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
Ribosomal genes in Escherichia coli
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
23 August 2017
Ab initio genotype-phenotype association reveals intrinsic modularity in genetic networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
14 September 2017
Assessment of the accuracy of matrix representation with parsimony analysis supertree construction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
26 June 2018
Characterization of the group 1 and group 2 sigma factors of the green sulfur bacterium Chlorobium tepidum and the green non-sulfur bacterium Chloroflexus aurantiacus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
26 June 2018
Horizontal transfer of ATPase genes--the tree of life becomes a net of life
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
26 June 2018
Isolation and characterization of the proton-translocating NADH: ubiquinone oxidoreductase from Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
26 June 2018
Clanistics: a multi-level perspective for harvesting unrooted gene trees.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Testing congruence in phylogenomic analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Palaeotemperature trend for Precambrian life inferred from resurrected proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Searching for convergence in phylogenetic Markov chain Monte Carlo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Organisation of the S10, spc and alpha ribosomal protein gene clusters in prokaryotic genomes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
The proton-pumping NADH:ubiquinone oxidoreductase (complex I) of Aquifex aeolicus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
The closest BLAST hit is often not the nearest neighbor.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Microbial genescapes: phyletic and functional patterns of ORF distribution among prokaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 September 2018
Archaeal phylogeny based on ribosomal proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879981
retrieved
2 October 2018
The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24281050
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The impact of reticulate evolution on genome phylogeny
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24281050
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24281050
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/GBE/EVT195
1 reference
stated in
Europe PubMed Central
PMC publication ID
3879981
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24281050%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
PMC publication ID
3879981
1 reference
stated in
Europe PubMed Central
PMC publication ID
3879981
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24281050%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
PubMed publication ID
24281050
1 reference
stated in
Europe PubMed Central
PMC publication ID
3879981
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24281050%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
ResearchGate publication ID
258954828
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