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Mechanism of ribosome recruitment by hepatitis C IRES RNA
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title
Mechanism of ribosome recruitment by hepatitis C IRES RNA
(English)
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main subject
Hepatitis C virus
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internal ribosome entry site
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hepatitis C
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inferred from title
author
Jennifer Doudna
series ordinal
4
object named as
J A Doudna
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author name string
J S Kieft
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1
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K Zhou
series ordinal
2
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R Jubin
series ordinal
3
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language of work or name
English
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publication date
February 2001
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published in
RNA
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volume
7
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page(s)
194-206
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issue
2
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cites work
An enzymatic footprinting analysis of the interaction of 40S ribosomal subunits with the internal ribosomal entry site of hepatitis C virus
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PubMed Central
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21 March 2017
Influence of correct secondary and tertiary RNA folding on the binding of cellular factors to the HCV IRES
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PubMed Central
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21 March 2017
Alterations to both the primary and predicted secondary structure of stem-loop IIIc of the hepatitis C virus 1b 5' untranslated region (5'UTR) lead to mutants severely defective in translation which cannot be complemented in trans by the [...]
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PubMed Central
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21 March 2017
A phylogenetically conserved stem-loop structure at the 5' border of the internal ribosome entry site of hepatitis C virus is required for cap-independent viral translation.
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PubMed Central
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21 March 2017
Heterogeneous nuclear ribonucleoprotein L interacts with the 3' border of the internal ribosomal entry site of hepatitis C virus
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PubMed Central
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21 March 2017
Functional analysis of the interaction between HCV 5'UTR and putative subunits of eukaryotic translation initiation factor eIF3
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PubMed Central
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21 March 2017
Specific interaction of eukaryotic translation initiation factor 3 with the 5' nontranslated regions of hepatitis C virus and classical swine fever virus RNAs
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PubMed Central
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21 March 2017
The La antigen binds 5' noncoding region of the hepatitis C virus RNA in the context of the initiator AUG codon and stimulates internal ribosome entry site-mediated translation
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PubMed Central
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21 March 2017
Stability of a stem-loop involving the initiator AUG controls the efficiency of internal initiation of translation on hepatitis C virus RNA.
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PubMed Central
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21 March 2017
Internal initiation of translation of hepatitis C virus RNA: the ribosome entry site is at the authentic initiation codon
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PubMed Central
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21 March 2017
A conserved helical element is essential for internal initiation of translation of hepatitis C virus RNA
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PubMed Central
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21 March 2017
Interaction of polypyrimidine tract-binding protein with the 5' noncoding region of the hepatitis C virus RNA genome and its functional requirement in internal initiation of translation
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PubMed Central
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21 March 2017
An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5' noncoding region
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PubMed Central
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21 March 2017
A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs
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PubMed Central
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21 March 2017
Biochemical characterization of mammalian translation initiation factor 3 (eIF3). Molecular cloning reveals that p110 subunit is the mammalian homologue of Saccharomyces cerevisiae protein Prt1
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PubMed Central
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21 March 2017
Starting at the beginning, middle, and end: translation initiation in eukaryotes
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PubMed Central
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7 April 2017
Canonical eukaryotic initiation factors determine initiation of translation by internal ribosomal entry
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PubMed Central
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7 April 2017
Structural requirements for initiation of translation by internal ribosome entry within genome-length hepatitis C virus RNA
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PubMed Central
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7 April 2017
The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites
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PubMed Central
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7 April 2017
Secondary structure of the 5' nontranslated regions of hepatitis C virus and pestivirus genomic RNAs
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370078
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7 April 2017
Internal ribosome entry site-mediated translation in hepatitis C virus replication.
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PubMed Central
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29 September 2017
Specific interaction of a 25-kilodalton cellular protein, a 40S ribosomal subunit protein, with the internal ribosome entry site of hepatitis C virus genome
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PubMed Central
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29 September 2017
Activity screening of bacteria containing Renilla luciferase plasmids.
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29 September 2017
Initiation of protein synthesis in eukaryotic cells
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29 September 2017
Unusual folding regions and ribosome landing pad within hepatitis C virus and pestivirus RNAs
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PubMed Central
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29 September 2017
Picornavirus internal ribosome entry segments: comparison of translation efficiency and the requirements for optimal internal initiation of translation in vitro
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29 September 2017
A kinetic light-scattering study of the binding of wheat germ protein synthesis initiation factor 3 to 40S ribosomal subunits and 80S ribosomes
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PubMed Central
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29 September 2017
Defining the inside and outside of a catalytic RNA molecule
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PubMed Central
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29 September 2017
Visualizing the higher order folding of a catalytic RNA molecule
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PubMed Central
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29 September 2017
Purification and characterization of initiation factor IF-E3 from rabbit reticulocytes
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PubMed Central
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29 September 2017
3'-terminal labelling of RNA with T4 RNA ligase
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PubMed Central
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29 September 2017
3'-Phosphatase activity in T4 polynucleotide kinase
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29 September 2017
The chemical basis of adenosine conservation throughout the Tetrahymena ribozyme
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2 June 2018
Genetic analysis of internal ribosomal entry site on hepatitis C virus RNA: implication for involvement of the highly ordered structure and cell type-specific transacting factors
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2 June 2018
Predicted secondary structure of the hepatitis G virus and GB virus-A 5'untranslated regions consistent with an internal ribosome entry site
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2 June 2018
Almost the entire 5' non-translated region of hepatitis C virus is required for cap-independent translation
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PubMed Central
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2 June 2018
Cellular proteins specifically bind to the 5'-noncoding region of hepatitis C virus RNA.
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PubMed Central
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2 June 2018
GCD10, a translational repressor of GCN4, is the RNA-binding subunit of eukaryotic translation initiation factor-3.
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2 June 2018
Modification interference analysis of reactions using RNA substrates
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Analysis of the role of phosphate oxygens in the group I intron from Tetrahymena
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2 June 2018
The hepatitis C virus internal ribosome entry site adopts an ion-dependent tertiary fold
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27 November 2018
Mutational analysis of a conserved tetraloop in the 5' untranslated region of hepatitis C virus identifies a novel RNA element essential for the internal ribosome entry site function.
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27 November 2018
Mutational analysis of two unstructured domains of the 5' untranslated region of HCV RNA.
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Variation of the hepatitis C virus 5' non-coding region: implications for secondary structure, virus detection and typing. The International HCV Collaborative Study Group.
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27 November 2018
Identifiers
DOI
10.1017/S1355838201001790
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1100013
OpenCitations bibliographic resource ID
1100013
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1100013
PMCID
1370078
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1100013
PubMed ID
11233977
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1100013
ResearchGate publication ID
12097850
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