(Q27487785)

English

Divergent evolution and molecular adaptation in the Drosophila odorant-binding protein family: inferences from sequence variation at the OS-E and OS-F genes

scientific article (publication date: 27 November 2008)

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scholarly article

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Divergent evolution and molecular adaptation in the Drosophila odorant-binding protein family: inferences from sequence variation at the OS-E and OS-F genes (English)

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protein evolution

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divergent evolution

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1 reference

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inferred from title

Alejandro Sánchez-Gracia

object named as

Alejandro Sánchez-Gracia

1

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object named as

Julio Rozas

2

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publication date

27 November 2008

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BMC Evolutionary Biology

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8

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323

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1

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https://scigraph.springernature.com/pub.10.1186/1471-2148-8-323

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1 reference

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1 reference

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Identifiers

10.1186/1471-2148-8-323

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Consolidated OpenCitations Corpus – April 2017

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release_npxsulsegbdk3j3oxfmh6o2jlm

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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