(Q27496597)

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Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21679424%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance (English)

1 reference

Europe PubMed Central

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5 February 2020

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Radix balthica

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Barbara Feldmeyer

1

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5 February 2020

Markus Pfenninger

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Markus Pfenninger

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5 February 2020

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Christopher W Wheat

2

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5 February 2020

Nicolas Krezdorn

3

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5 February 2020

Björn Rotter

4

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5 February 2020

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16 June 2011

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5 February 2020

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5 February 2020

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5 February 2020

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317

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5 February 2020

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16 June 2011

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https://scigraph.springernature.com/pub.10.1186/1471-2164-12-317

0 references

Comparing de novo assemblers for 454 transcriptome data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

20 March 2017

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1 reference

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Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis

1 reference

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20 March 2017

Construction of an adult barnacle (Balanus amphitrite) cDNA library and selection of reference genes for quantitative RT-PCR studies

1 reference

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1 reference

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20 March 2017

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

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20 March 2017

Broad phylogenomic sampling improves resolution of the animal tree of life

1 reference

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20 March 2017

Annotation of expressed sequence tags for the East African cichlid fish Astatotilapia burtoni and evolutionary analyses of cichlid ORFs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

20 March 2017

Basic local alignment search tool

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

20 March 2017

https://api.crossref.org/works/10.1186%2F1471-2164-12-317

22 April 2017

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

7 April 2017

The complete mitochondrial genome of Radix balthica (Pulmonata, Basommatophora), obtained by low coverage shot gun next generation sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

1 reference

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29 September 2017

Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics

1 reference

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29 September 2017

Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencing

1 reference

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29 September 2017

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis.

1 reference

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29 September 2017

Inferring the past to predict the future: climate modelling predictions and phylogeography for the freshwater gastropod Radix balthica (Pulmonata, Basommatophora).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Characterizing the mouse ES cell transcriptome with Illumina sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Molecular ecology of global change.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

The molecular ecologist's guide to expressed sequence tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

29 September 2017

Gene discovery and annotation using LCM-454 transcriptome sequencing.

1 reference

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29 September 2017

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1 reference

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29 September 2017

Simple cDNA normalization using kamchatka crab duplex-specific nuclease

1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128070

2 June 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/21679424

12 December 2020

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10.1186/1471-2164-12-317

2 references

Consolidated OpenCitations Corpus – April 2017

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5 February 2020

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9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-317

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21679424%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21679424%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

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