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Chromatin-binding protein BDF1 YLR399C
fungal protein found in Saccharomyces cerevisiae S288c
BDF1
YLR399C
chromatin-binding protein BDF1
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edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P35817
subclass of
protein
1 reference
stated in
UniProt
retrieved
19 January 2017
UniProt protein ID
P35817
part of
Bromodomain-like superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P35817
NET domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P35817
NET domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
bromodomain protein family
1 reference
based on heuristic
inferred from protein domain or family
Bromodomain, conserved site, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P35817
encoded by
BDF1
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P35817
molecular function
chromatin binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IDA
lysine-acetylated histone binding
determination method
IDA
2 references
retrieved
9 May 2019
stated in
Different sensitivities of bromodomain factors 1 and 2 to histone H4 acetylation
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IDA
retrieved
9 May 2019
stated in
Biochemical profiling of histone binding selectivity of the yeast bromodomain family
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IDA
TFIID-class transcription factor complex binding
determination method
IDA
IPI
2 references
retrieved
9 May 2019
stated in
Bromodomain factor 1 corresponds to a missing piece of yeast TFIID.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
Bromodomain factor 1 corresponds to a missing piece of yeast TFIID.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IDA
protein binding
determination method
IPI
8 references
retrieved
9 May 2019
stated in
Interplay between BDF1 and BDF2 and their roles in regulating the yeast salt stress response
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
Bromodomain factor 1 corresponds to a missing piece of yeast TFIID.
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
High-quality binary protein interaction map of the yeast interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
Functional organization of the yeast proteome by systematic analysis of protein complexes
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
Defining the budding yeast chromatin-associated interactome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
Proteome survey reveals modularity of the yeast cell machinery
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
retrieved
9 May 2019
stated in
A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
cell component
Swr1 complex
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
N terminus of Swr1 binds to histone H2AZ and provides a platform for subunit assembly in the chromatin remodeling complex
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IDA
nucleus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IEA
biological process
DNA repair
determination method
IMP
IEA
2 references
retrieved
9 May 2019
stated in
Bdf1, a yeast chromosomal protein required for sporulation
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IMP
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IEA
snRNA transcription
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
The yeast BDF1 gene encodes a transcription factor involved in the expression of a broad class of genes including snRNAs.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IMP
regulation of silent mating-type cassette heterochromatin assembly
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IMP
negative regulation of heterochromatin assembly
determination method
IMP
IGI
2 references
retrieved
9 May 2019
stated in
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IMP
retrieved
9 May 2019
stated in
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IGI
regulation of transcription, DNA-templated
determination method
IEA
1 reference
retrieved
27 March 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P35817&geneProductId=UniProtKB:P35817
determination method
IEA
sporulation resulting in formation of a cellular spore
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IEA
chromatin remodeling
determination method
IPI
1 reference
retrieved
9 May 2019
stated in
A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IPI
cellular response to DNA damage stimulus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IEA
transcription, DNA-templated
determination method
IEA
1 reference
retrieved
27 March 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P35817
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P35817&geneProductId=UniProtKB:P35817
determination method
IEA
positive regulation of histone exchange
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
NuA4-dependent acetylation of nucleosomal histones H4 and H2A directly stimulates incorporation of H2A.Z by the SWR1 complex.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P35817
determination method
IMP
has part(s)
bromodomain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P35817
NET domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P35817
Bromodomain, conserved site
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P35817
Identifiers
RefSeq protein ID
NP_013503
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
851115
UniProt protein ID
P35817
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P35817
Ensembl protein ID
YLR399C
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YLR399C
Saccharomyces Genome Database ID
S000004391
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
851115
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