(Q27548539)

Exosome complex RNA-binding protein 1/RRP40/RRP4

1 reference

K Homology domain, type 1 superfamily

1 reference

Exosome complex component, N-terminal domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

K Homology domain, type 1, protein family

1 reference

based on heuristic

inferred from protein domain or family

found in taxon

Saccharomyces cerevisiae S288c

1 reference

25 May 2022

1 reference

25 May 2022

10 references

8 April 2019

Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

A single subunit, Dis3, is essentially responsible for yeast exosome core activity

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Proteome survey reveals modularity of the yeast cell machinery

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

RNA degradation paths in a 12-subunit nuclear exosome complex

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

RNA channelling by the eukaryotic exosome

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Structure of an Rrp6–RNA exosome complex bound to poly(A) RNA

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Probing genuine strong interactions and post-translational modifications in the heterogeneous yeast exosome protein complex.

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Subunit architecture of multimeric complexes isolated directly from cells

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

cytoplasmic exosome (RNase complex)

IEA

nuclear exosome (RNase complex)

IDA

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear exosome (RNase complex)

IEA

3 references

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Comparative multiplexed mass spectrometric analyses of endogenously expressed yeast nuclear and cytoplasmic exosomes.

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

cytoplasmic exosome (RNase complex)

3 references

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Comparative multiplexed mass spectrometric analyses of endogenously expressed yeast nuclear and cytoplasmic exosomes.

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay

exosome (RNase complex)

1 reference

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear-transcribed mRNA catabolic process, non-stop decay

IC

1 reference

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

polyadenylation-dependent snoRNA 3'-end processing

IC

1 reference

21 June 2018

Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

nuclear polyadenylation-dependent tRNA catabolic process

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

IDA

nonfunctional rRNA decay

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'

IC

1 reference

21 June 2018

The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

4 references

21 June 2018

The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

21 June 2018

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

21 June 2018

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

21 June 2018

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

U4 snRNA 3'-end processing

1 reference

21 June 2018

Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

nuclear polyadenylation-dependent rRNA catabolic process

1 reference

21 June 2018

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?protein=P38792&geneProductId=UniProtKB:P38792

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

CUT catabolic process

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear polyadenylation-dependent mRNA catabolic process

1 reference

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

1 reference

8 April 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

exonucleolytic catabolism of deadenylated mRNA

IEA

1 reference

8 April 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

5 references

8 April 2019

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'

nuclear polyadenylation-dependent tRNA catabolic process

3 references

8 April 2019

The exosome subunit Rrp44 plays a direct role in RNA substrate recognition

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

A new yeast poly(A) polymerase complex involved in RNA quality control

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

8 April 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38792

polyadenylation-dependent snoRNA 3'-end processing

K Homology domain, type 1

1 reference

Exosome complex component, N-terminal domain

1 reference

Identifiers

1 reference

20 March 2022

1 reference

25 May 2022

1 reference