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MRNA splicing protein PRP28 YDR243C
fungal protein found in Saccharomyces cerevisiae S288c
PRP28
YDR243C
mRNA splicing protein PRP28
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Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P23394
subclass of
protein
1 reference
stated in
UniProt
retrieved
19 January 2017
UniProt protein ID
P23394
part of
P-loop containing nucleoside triphosphate hydrolase
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
Helicase superfamily 1/2, ATP-binding domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Helicase, C-terminal domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
DEAD/DEAH box helicase
1 reference
based on heuristic
inferred from protein domain or family
RNA helicase, DEAD-box type, Q motif, protein family
1 reference
based on heuristic
inferred from protein domain or family
ATP-dependent RNA helicase DEAD-box, conserved site, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P23394
encoded by
PRP28
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P23394
molecular function
ATP binding
determination method
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
first spliceosomal transesterification activity
determination method
IMP
1 reference
retrieved
14 February 2019
stated in
PRP28, a 'DEAD-box' protein, is required for the first step of mRNA splicing in vitro
GOA
curator
SGD
Saccharomyces Genome Database ID
S000002651
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IMP
helicase activity
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
RNA binding
determination method
IDA
1 reference
retrieved
14 February 2019
stated in
Splicing proofreading at 5' splice sites by ATPase Prp28p
GOA
curator
SGD
Saccharomyces Genome Database ID
S000002651
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IDA
hydrolase activity
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
nucleotide binding
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
nucleic acid binding
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
protein binding
determination method
IPI
1 reference
retrieved
5 June 2018
stated in
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P23394&geneProductId=UniProtKB:P23394
determination method
IPI
cell component
U5 snRNP
determination method
IDA
1 reference
retrieved
14 February 2019
stated in
Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae
GOA
curator
SGD
Saccharomyces Genome Database ID
S000002651
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IDA
nucleus
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
nucleolus
determination method
IBA
1 reference
retrieved
5 June 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P23394&geneProductId=UniProtKB:P23394
determination method
IBA
cytoplasm
determination method
IBA
IEA
2 references
retrieved
5 June 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P23394&geneProductId=UniProtKB:P23394
determination method
IEA
retrieved
5 June 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P23394&geneProductId=UniProtKB:P23394
determination method
IBA
cytoplasm
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
biological process
mRNA processing
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
mRNA 5'-splice site recognition
determination method
IMP
1 reference
retrieved
14 February 2019
stated in
Splicing proofreading at 5' splice sites by ATPase Prp28p
GOA
curator
SGD
Saccharomyces Genome Database ID
S000002651
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IMP
RNA splicing
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P23394
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P23394
determination method
IEA
RNA secondary structure unwinding
determination method
IBA
1 reference
retrieved
5 June 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P23394&geneProductId=UniProtKB:P23394
determination method
IBA
has part(s)
DEAD/DEAH box helicase domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
RNA helicase, DEAD-box type, Q motif
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
Helicase superfamily 1/2, ATP-binding domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
Helicase, C-terminal
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
ATP-dependent RNA helicase DEAD-box, conserved site
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P23394
Identifiers
RefSeq protein ID
NP_010529
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
851830
UniProt protein ID
P23394
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P23394
Ensembl protein ID
YDR243C
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YDR243C
Saccharomyces Genome Database ID
S000002651
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
851830
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