(Q27640706)

1

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Michael A van der Horst

2

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Wim Crielaard

4

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Daan M F van Aalten

Journal of Biological Chemistry

5

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language of work or name

English

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publication date

16 May 2003

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published in

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volume

278

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issue

20

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page(s)

18434-9

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cites work

PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and redox

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The Drosophila single-minded gene encodes a helix-loop-helix protein that acts as a master regulator of CNS midline development

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Glu46 donates a proton to the 4-hydroxycinnamate anion chromophore during the photocycle of photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Evidence for trans-cis isomerization of the p-coumaric acid chromophore as the photochemical basis of the photocycle of photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure of a protein photocycle intermediate by millisecond time-resolved crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure at 0.85 A resolution of an early protein photocycle intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Picosecond decay kinetics and quantum yield of fluorescence of the photoactive yellow protein from the halophilic purple phototrophic bacterium, Ectothiorhodospira halophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

New photocycle intermediates in the photoactive yellow protein from Ectothiorhodospira halophila: picosecond transient absorption spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Measurement and global analysis of the absorbance changes in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Photoactive yellow protein from the purple phototrophic bacterium, Ectothiorhodospira halophila. Quantum yield of photobleaching and effects of temperature, alcohols, glycerol, and sucrose on kinetics of photobleaching and recovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Protonation/deprotonation reactions triggered by photoactivation of photoactive yellow protein from Ectothiorhodospira halophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structural and dynamic changes of photoactive yellow protein during its photocycle in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Light-induced unfolding of photoactive yellow protein mutant M100L.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Protein folding thermodynamics applied to the photocycle of the photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Global conformational changes upon receptor stimulation in photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Formation of a new buried charge drives a large-amplitude protein quake in photoreceptor activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Concerted motions in the photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Conformational substates in different crystal forms of the photoactive yellow protein-Correlation with theoretical and experimental flexibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Engineering photocycle dynamics. Crystal structures and kinetics of three photoactive yellow protein hinge-bending mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Crystal structure and functional analysis of the HERG potassium channel N terminus: a eukaryotic PAS domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure of a flavin-binding plant photoreceptor domain: Insights into light-mediated signal transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure of a biological oxygen sensor: a new mechanism for heme-driven signal transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

AMoRe: an automated package for molecular replacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Improved methods for building protein models in electron density maps and the location of errors in these models

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Essential dynamics of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Protein dynamics derived from clusters of crystal structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Domain motions in bacteriophage T4 lysozyme: a comparison between molecular dynamics and crystallographic data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Crystal structure of carboxypeptidase A complexed with D-cysteine at 1.75 A - inhibitor-induced conformational changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

High resolution crystal structure of the human PDK1 catalytic domain defines the regulatory phosphopeptide docking site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

A comparison of structural and dynamic properties of different simulation methods applied to SH3

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Essential dynamics of the cellular retinol-binding protein--evidence for ligand-induced conformational changes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure and flexibility of Streptococcus agalactiae hyaluronate lyase complex with its substrate. Insights into the mechanism of processive degradation of hyaluronan

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Protein structure comparison by alignment of distance matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Solution structure and backbone dynamics of the photoactive yellow protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The LOV domain family: photoresponsive signaling modules coupled to diverse output domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

WHAT IF: a molecular modeling and drug design program

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The consistency of large concerted motions in proteins in molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The essential dynamics of thermolysin: Confirmation of the hinge-bending motion and comparison of simulations in vacuum and water

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Light-induced global conformational change of photoactive yellow protein in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

The role of the N-terminal domain of photoactive yellow protein in the transient partial unfolding during signalling state formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Structure of the photoactive yellow protein reconstituted with caffeic acid at 1.16 Å resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

Prediction of protein conformational freedom from distance constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301701200

21 January 2018

Identifiers

DOI

10.1074/JBC.M301701200

1 reference

Consolidated OpenCitations Corpus – April 2017

1 reference

Consolidated OpenCitations Corpus – April 2017

PubMed publication ID

12639952

1 reference

Consolidated OpenCitations Corpus – April 2017