(Q27642312)

2

Antoine Royant

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Eva Pebay-Peyroula

8

Eva Pebay-Peyroula

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Gisela Larsson

3

Gisela Larsson

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Frida Jacobson

4

Frida Jacobson

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David van der Spoel

6

David van der Spoel

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Richard Neutze

9

Richard Neutze

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Ehud M Landau

7

Ehud M Landau

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author name string

Gisela Larsson

3

0 references

Tom Taylor

Journal of Biological Chemistry

5

0 references

language of work or name

English

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publication date

16 January 2004

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published in

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volume

279

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issue

3

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page(s)

2147-58

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cites work

Helix deformation is coupled to vectorial proton transport in the photocycle of bacteriorhodopsin

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Kinetic and spectroscopic evidence for an irreversible step between deprotonation and reprotonation of the Schiff base in the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystal structure of photolysed carbonmonoxy-myoglobin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of a protein photocycle intermediate by millisecond time-resolved crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure at 0.85 A resolution of an early protein photocycle intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of a ligand-binding intermediate in wild-type carbonmonoxy myoglobin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Early structural rearrangements in the photocycle of an integral membrane sensory receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

High-resolution X-ray structure of an early intermediate in the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystallographic structure of the retinal and the protein after deprotonation of the Schiff base: the switch in the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Mechanism of Proton Transport in Bacteriorhodopsin from Crystallographic Structures of the K, L, M1, M2, and M2′ Intermediates of the Photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural changes in bacteriorhodopsin during ion transport at 2 angstrom resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Molecular mechanism of vectorial proton translocation by bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Bacteriorhodopsin: a high-resolution structural view of vectorial proton transport

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Intramembrane signaling mediated by hydrogen-bonding of water and carboxyl groups in bacteriorhodopsin and rhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural characterization of the L-to-M transition of the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Tight Asp-85--Thr-89 association during the pump switch of bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Trapping and spectroscopic identification of the photointermediates of bacteriorhodopsin at low temperatures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Lipidic cubic phases: a novel concept for the crystallization of membrane proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Titration of aspartate-85 in bacteriorhodopsin: what it says about chromophore isomerization and proton release

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

The CCP4 suite: programs for protein crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Detecting and overcoming crystal twinning

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Protein, lipid and water organization in bacteriorhodopsin crystals: a molecular view of the purple membrane at 1.9 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Ion permeation mechanism of the potassium channel

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A model-independent approach to assigning bacteriorhodopsin's intramolecular reactions to photocycle intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Watching a protein as it functions with 150-ps time-resolved x-ray crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystallographic characterization by X-ray diffraction of the M-intermediate from the photo-cycle of bacteriorhodopsin at room temperature

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Glutamic Acid 204 is the Terminal Proton Release Group at the Extracellular Surface of Bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Atomic resolution structures of bacteriorhodopsin photocycle intermediates: the role of discrete water molecules in the function of this light-driven ion pump

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Infrared spectroscopic demonstration of a conformational change in bacteriorhodopsin involved in proton pumping

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Dynamics of different functional parts of bacteriorhodopsin: H-2H labeling and neutron scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Controlling the pKa of the bacteriorhodopsin Schiff base by use of artificial retinal analogues

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Chemical dynamics in proteins: the photoisomerization of retinal in bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Objective comparison of protein structures: error-scaled difference distance matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

NMR probes of vectoriality in the proton-motive photocycle of bacteriorhodopsin: evidence for an 'electrostatic steering' mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A unifying concept for ion translocation by retinal proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Halorhodopsin: light-driven ion pumping made simple?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: evidence for a distorted 13-cis retinal chromophore

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural changes of pharaonis phoborhodopsin upon photoisomerization of the retinal chromophore: infrared spectral comparison with bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structural changes during the formation of early intermediates in the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A covalent link between the chromophore and the protein backbone of bacteriorhodopsin is not required for forming a photochemically active pigment analogous to the wild type

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Bacteriorhodopsin can function without a covalent linkage between retinal and protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure of bacteriorhodopsin at 1.55 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A study on the mechanism of the proton transport in bacteriorhodopsin: the importance of the water molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

X-ray structure of sensory rhodopsin II at 2.1-A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Crystal Structure of Sensory Rhodopsin II at 2.4 Angstroms: Insights into Color Tuning and Transducer Interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Two light-transducing membrane proteins: bacteriorhodopsin and the mammalian rhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Determination of the transiently lowered pKa of the retinal Schiff base during the photocycle of bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

A large photolysis-induced pKa increase of the chromophore counterion in bacteriorhodopsin: implications for ion transport mechanisms of retinal proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Proton translocation by bacteriorhodopsin in the absence of substantial conformational changes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Detection and characterization of merohedral twinning in two protein crystals: bacteriorhodopsin and p67phox

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Spectroscopic Characterization of Bacteriorhodopsin's L-intermediate in 3D Crystals Cooled to 170 K¶

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Ultraviolet and visible absorption spectra of the purple membrane protein and the photocycle intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Vibrational spectroscopy of bacteriorhodopsin mutants: light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Interaction of aspartate-85 with a water molecule and the protonated Schiff base in the L intermediate of bacteriorhodopsin: a Fourier-transform infrared spectroscopic study

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

The predischarge chromophore in bacteriorhodopsin: a 15N solid-state NMR study of the L photointermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Enzymic release of crystals from lipidic cubic phases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

[22] Detecting and overcoming crystal twinning

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Structure determination of plastocyanin from a specimen with a hemihedral twinning fraction of one-half

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Protein conformational changes in the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Glutamate-194 to cysteine mutation inhibits fast light-induced proton release in bacteriorhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Arginine activity in the proton-motive photocycle of bacteriorhodopsin: solid-state NMR studies of the wild-type and D85N proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Evidence for light-induced lysine conformational changes during the primary event of the bacteriorhodopsin photocycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

General concept for ion translocation by halobacterial retinal proteins: the isomerization/switch/transfer (IST) model

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200

Hydrophilicity of cavities in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M300709200