(Q27646306)

1

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James Z Chen

2

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Pierre-Damien Coureux

3

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M Elizabeth Stroupe

4

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Marcus Fändrich

Journal of Molecular Biology

5

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language of work or name

English

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publication date

17 August 2007

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published in

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volume

371

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page(s)

812-35

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issue

3

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cites work

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Study of the structural dynamics of the E coli 70S ribosome using real-space refinement

20 March 2017

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A helical turn motif in Mss4 is a critical determinant of Rab binding and nucleotide release

20 March 2017

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The tobacco mosaic virus particle: structure and assembly

20 March 2017

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The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution

20 March 2017

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Electron-crystallographic refinement of the structure of bacteriorhodopsin

20 March 2017

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The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution

20 March 2017

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Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction

20 March 2017

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Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

20 March 2017

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Structure of the U2 strain of tobacco mosaic virus refined at 3.5 A resolution using X-ray fiber diffraction

20 March 2017

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Raster3D: photorealistic molecular graphics

20 March 2017

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Developments in the CCP4 molecular-graphics project

20 March 2017

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Coot: model-building tools for molecular graphics

20 March 2017

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UCSF Chimera--a visualization system for exploratory research and analysis

20 March 2017

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Accurate determination of local defocus and specimen tilt in electron microscopy

20 March 2017

1 reference

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EMAN: semiautomated software for high-resolution single-particle reconstructions

20 March 2017

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SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

20 March 2017

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Realizing the potential of electron cryo-microscopy

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Refined structure of the nicotinic acetylcholine receptor at 4A resolution

20 March 2017

1 reference

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Conformational disorder of proteins assessed by real-space molecular dynamics refinement.

20 March 2017

1 reference

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Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Cryo-electron microscopy of vitrified specimens

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Atomic model of the actin filament

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Protein structure determination in solution by NMR spectroscopy

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

7 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Automated molecular microscopy: the new Leginon system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

TopDraw: a sketchpad for protein structure topology cartoons

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

FREALIGN: high-resolution refinement of single particle structures

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Reconstruction of three dimensional structures from electron micrographs

24 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Radiation damage in macromolecular cryocrystallography

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

The structure of a filamentous bacteriophage

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Single particle analysis of filamentous and highly elongated macromolecular assemblies.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Low-resolution structure refinement in electron microscopy.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Electron cryo-microscopy shows how strong binding of myosin to actin releases nucleotide

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

ASSEMBLY AND STABILITY OF THE TOBACCO MOSAIC VIRUS PARTICLE.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Alignment error envelopes for single particle analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

A robust algorithm for the reconstruction of helical filaments using single-particle methods

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Parameters affecting specimen flatness of two-dimensional crystals for electron crystallography

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Cryo-electron microscopy structure of an SH3 amyloid fibril and model of the molecular packing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Three-dimensional structure of bovine NADH:ubiquinone oxidoreductase (complex I) at 22 A in ice.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Caspar carboxylates: the structural basis of tobamovirus disassembly.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Refined atomic model of the four-layer aggregate of the tobacco mosaic virus coat protein at 2.4-A resolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Structure of tobacco mosaic virus at 3.6 A resolution: implications for assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

High resolution cryo system designed for JEM 100CX electron microscope

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Visualization of alpha-helices in tobacco mosaic virus by cryo-electron microscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Processing images of helical structures: a new twist

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Image contrast in high-resolution electron microscopy of biological macromolecules: TMV in ice.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Protein-RNA interactions during TMV assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

The ribosome at improved resolution: new techniques for merging and orientation refinement in 3D cryo-electron microscopy of biological particles

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Three-dimensional structure of halorhodopsin at 7 A resolution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Polymerization-depolymerization of tobacco mosaic virus protein. VII. A model

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Three-dimensional reconstruction of single particles embedded in ice

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Structure of RNA and RNA binding site in tobacco mosaic virus from 4-A map calculated from X-ray fibre diagrams

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Protein disk of tobacco mosaic virus at 2.8 A resolution showing the interactions within and between subunits

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Electron energy filtering significantly improves amplitude contrast of frozen-hydrated protein at 300kV.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Considerations for the refinement of low-resolution crystal structures

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Localization and dynamic behavior of ribosomal protein L30e.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

An Infectious Nucleoprotein from Tobacco Mosaic Virus

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Reconstitution of tobacco mosaic virus. III. Improved methods and the use of mixed nucleic acids

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Studies on the alkaline degradation of tobacco mosaic virus. I. Ultracentrifugal analysis

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Protein hydration observed by X-ray diffraction. Solvation properties of penicillopepsin and neuraminidase crystal structures.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Site-directed mutagenesis confirms the involvement of carboxylate groups in the disassembly of tobacco mosaic virus

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2025690

Inclusion of thermal motion in crystallographic structures by restrained molecular dynamics

27 November 2018

1 reference

12 December 2020

Real-space molecular-dynamics structure refinement

1 reference

12 December 2020

Carboxylate interactions involved in the disassembly of tobacco mosaic tobamovirus

1 reference

12 December 2020

Resolution measurement in structures derived from single particles

1 reference

12 December 2020

Quaternary structure of a mature amyloid fibril from Alzheimer's Abeta(1-40) peptide

1 reference

12 December 2020

Distortion correction of tubular crystals: improvements in the acetylcholine receptor structure

1 reference

12 December 2020