(Q27650063)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

title

Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

0 references

1

1 reference

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4 January 2020

4

Kunio Miki

1 reference

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4 January 2020

author name string

Akiko Kita

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Kazuo Kobayashi

series ordinal

3

1 reference

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4 January 2020

language of work or name

English

0 references

publication date

11 March 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

4 January 2020

published in

1 reference

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4 January 2020

volume

105

1 reference

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4 January 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

page(s)

4121-4126

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR

4 January 2020

cites work

1 reference

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Crystal structure of the transcription activator BmrR bound to DNA and a drug

20 March 2017

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Refined X-ray structures of the oxidized, at 1.3 A, and reduced, at 1.17 A, [2Fe-2S] ferredoxin from the cyanobacterium Anabaena PCC7119 show redox-linked conformational changes

20 March 2017

1 reference

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Automated MAD and MIR structure solution

20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

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20 March 2017

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Improved methods for building protein models in electron density maps and the location of errors in these models

22 April 2017

1 reference

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The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa

20 March 2017

1 reference

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Automated structure solution, density modification and model building

20 March 2017

1 reference

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The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

7 April 2017

1 reference

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Crystallization and preliminary X-ray crystallographic studies of the oxidative-stress sensor SoxR and its complex with DNA.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Redox-dependent structural reorganization in putidaredoxin, a vertebrate-type [2Fe-2S] ferredoxin from Pseudomonas putida

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

29 September 2017

Bacterial redox sensors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Functional analysis of SoxR residues affecting transduction of oxidative stress signals into gene expression.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

The MerR family of transcriptional regulators.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

A reducing system of the superoxide sensor SoxR in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Transcription-defective soxR mutants of Escherichia coli: isolation and in vivo characterization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Redox-operated genetic switches: the SoxR and OxyR transcription factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Transcriptional activation of an Escherichia coli copper efflux regulon by the chromosomal MerR homologue, cueR.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Direct nitric oxide signal transduction via nitrosylation of iron-sulfur centers in the SoxR transcription activator

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

DNA distortion mechanism for transcriptional activation by ZntR, a Zn(II)-responsive MerR homologue in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

An iron-sulfur center essential for transcriptional activation by the redox-sensing SoxR protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Activation by nitric oxide of an oxidative-stress response that defends Escherichia coli against activated macrophages

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

A protein that activates expression of a multidrug efflux transporter upon binding the transporter substrates.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Positive control of a global antioxidant defense regulon activated by superoxide-generating agents in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

soxR, a locus governing a superoxide response regulon in Escherichia coli K-12

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Molecular characterization of the soxRS genes of Escherichia coli: two genes control a superoxide stress regulon

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Fumarase C, the stable fumarase of Escherichia coli, is controlled by the soxRS regulon

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Two-stage control of an oxidative stress regulon: the Escherichia coli SoxR protein triggers redox-inducible expression of the soxS regulatory gene

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Redox signal transduction via iron-sulfur clusters in the SoxR transcription activator.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

The redox state of the [2Fe-2S] clusters in SoxR protein regulates its activity as a transcription factor.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

DNA-bend modulation in a repressor-to-activator switching mechanism

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Binuclear [2Fe-2S] clusters in the Escherichia coli SoxR protein and role of the metal centers in transcription

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2393793

Mta, a global MerR-type regulator of the Bacillus subtilis multidrug-efflux transporters

2 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709188105

The structural mechanism for transcription activation by MerR family member multidrug transporter activation, N terminus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709188105

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709188105

MOLREP: an Automated Program for Molecular Replacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709188105

Isolation of reductase for SoxR that governs an oxidative response regulon from Escherichia coli

21 January 2018

1 reference

12 December 2020

Design of an emission ratiometric biosensor from MerR family proteins: a sensitive and selective sensor for Hg2+

1 reference

12 December 2020

Overproduction and physical characterization of SoxR, a [2Fe-2S] protein that governs an oxidative response regulon in Escherichia coli

1 reference

12 December 2020

Redox signal transduction: mutations shifting [2Fe-2S] centers of the SoxR sensor-regulator to the oxidized form

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0709188105

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

ADS bibcode

2008PNAS..105.4121W

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18334645%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

2 references