(Q27650190)

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Oxygen Pressurized X-Ray Crystallography: Probing the Dioxygen Binding Site in Cofactorless Urate Oxidase and Implications for Its Catalytic Mechanism

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18375516%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Oxygen pressurized X-ray crystallography: probing the dioxygen binding site in cofactorless urate oxidase and implications for its catalytic mechanism (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18375516%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

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X-ray crystallography

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3

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4 January 2020

Thierry Prangé

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4 January 2020

Jana Sopková-de Oliveira Santos

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Jana Sopkova-de Oliveira Santos

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4 January 2020

Nathalie Colloc'h

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4 January 2020

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Laure Gabison

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4 January 2020

Muhannad Altarsha

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4 January 2020

Mohamed Chiadmi

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Mohamed Chiadmi

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4 January 2020

Guillaume Marassio

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Guillaume Marassio

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4 January 2020

Mohamed El Hajji

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Mohamed El Hajji

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4 January 2020

Bertrand Castro

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Bertrand Castro

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4 January 2020

Jacques H Abraini

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Jacques H Abraini

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4 January 2020

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28 March 2008

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4 January 2020

Biophysical Journal

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4 January 2020

95

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4 January 2020

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4 January 2020

2415-2422

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Europe PubMed Central

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4 January 2020

Probing the oxygen-binding site of the human formylglycine-generating enzyme using halide ions

1 reference

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20 March 2017

A general binding mechanism for all human sulfatases by the formylglycine-generating enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

The structure of ActVA-Orf6, a novel type of monooxygenase involved in actinorhodin biosynthesis.

1 reference

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20 March 2017

Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Exploring hydrophobic sites in proteins with xenon or krypton

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Crystal structure of Proteus mirabilis PR catalase with and without bound NADPH

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Uric acid provides an antioxidant defense in humans against oxidant- and radical-caused aging and cancer: a hypothesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

SHELXL: high-resolution refinement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

The integration of macromolecular diffraction data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

The CCP4 suite: programs for protein crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Oxygenases without requirement for cofactors or metal ions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

20 March 2017

Very fast empirical prediction and rationalization of protein pKa values

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

7 April 2017

Protein crystallography under xenon and nitrous oxide pressure: comparison with in vivo pharmacology studies and implications for the mechanism of inhaled anesthetic action.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

A survey of active site access channels in cytochromes P450.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Use of noble gases xenon and krypton as heavy atoms in protein structure determination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

The nature of sites of general anaesthetic action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Identification and purification of hydroxyisourate hydrolase, a novel ureide-metabolizing enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Crystal structure of the protein drug urate oxidase-inhibitor complex at 2.05 A resolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Activation of molecular oxygen by flavins and flavoproteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Cavities in proteins: structure of a metmyoglobin-xenon complex solved to 1.9 A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Identification of peroxisomal targeting signals located at the carboxy terminus of four peroxisomal proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Rat urate oxidase produced by recombinant baculovirus expression: formation of peroxisome crystalloid core-like structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Two independent mutational events in the loss of urate oxidase during hominoid evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Cloning and expression in Escherichia coli of the gene encoding Aspergillus flavus urate oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Degradation of purines and pyrimidines by microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

29 September 2017

Kinetic mechanism and cofactor content of soybean root nodule urate oxidase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

2 June 2018

Mouse transthyretin-related protein is a hydrolase which degrades 5-hydroxyisourate, the end product of the uricase reaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Crystal structure of 3-hydroxybenzoate hydroxylase from Comamonas testosteroni has a large tunnel for substrate and oxygen access to the active site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Urate to allantoin, specifically (S)-allantoin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Procatalytic ligand strain. Ionization and perturbation of 8-nitroxanthine at the urate oxidase active site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Transthyretin-related proteins function to facilitate the hydrolysis of 5-hydroxyisourate, the end product of the uricase reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Crystal structure of amine oxidase from bovine serum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Using xenon as a probe for dioxygen-binding sites in copper amine oxidases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Dioxygenases without requirement for cofactors and their chemical model reaction: compulsory order ternary complex mechanism of 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase involving general base catalysis by histidine 251 and single-electron oxidat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Complexed and ligand-free high-resolution structures of urate oxidase (Uox) from Aspergillus flavus: a reassignment of the active-site binding mode

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Thiouric acids as substrates and inhibitors of mammalian urate oxidase

1 reference

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27 November 2018

The mechanism of the action of uricase

1 reference

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27 November 2018

General base catalysis in the urate oxidase reaction: evidence for a novel Thr-Lys catalytic diad

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Urate oxidase: single-turnover stopped-flow techniques for detecting two discrete enzyme-bound intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Modification of a reactive cysteine explains differences between rasburicase and Uricozyme, a natural Aspergillus flavus uricase

1 reference

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27 November 2018

Sequence and structural features of the T-fold, an original tunnelling building unit

1 reference

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27 November 2018

Spectroscopic characterization of intermediates in the urate oxidase reaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2517026

27 November 2018

Recapture of [S]-allantoin, the product of the two-step degradation of uric acid, by urate oxidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18375516

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://pubmed.ncbi.nlm.nih.gov/18375516

12 December 2020

based on heuristic

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Identifiers

10.1529/BIOPHYSJ.107.122184

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4 January 2020

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4 January 2020

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4 January 2020

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