(Q27653952)

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Crystal Structures of YkuI and Its Complex with Second Messenger Cyclic Di-GMP Suggest Catalytic Mechanism of Phosphodiester Bond Cleavage by EAL Domains

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scholarly article

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Crystal Structures of YkuI and Its Complex with Second Messenger Cyclic Di-GMP Suggest Catalytic Mechanism of Phosphodiester Bond Cleavage by EAL Domains (English)

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crystal structure

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Tilman Schirmer

9

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Ludmilla Shuvalova

3

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1

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6

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Frank R. Collart

object named as

Frank R Collart

8

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Wayne F. Anderson

10

object named as

Wayne F Anderson

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Joseph Brunzelle

4

object named as

Joseph S Brunzelle

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author name string

Sivaraman Padavattan

2

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Darcie J Miller

5

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Claudia Massa

7

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language of work or name

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publication date

8 May 2009

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Journal of Biological Chemistry

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284

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13174-84

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19

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Phosphorylation-Independent Regulation of the Diguanylate Cyclase WspR

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Structure of BeF3- -modified response regulator PleD: implications for diguanylate cyclase activation, catalysis, and feedback inhibition

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20 March 2017

Roles of cyclic diguanylate in the regulation of bacterial pathogenesis

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20 March 2017

The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase

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20 March 2017

The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains

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20 March 2017

Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into biochemistry of the GGDEF protein domain

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20 March 2017

Structural basis of activity and allosteric control of diguanylate cyclase

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Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain

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20 March 2017

The two GAF domains in phosphodiesterase 2A have distinct roles in dimerization and in cGMP binding

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A new lysozyme fold. Crystal structure of the muramidase from Streptomyces coelicolor at 1.65 A resolution

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20 March 2017

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20 March 2017

GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility

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20 March 2017

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20 March 2017

Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid

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7 April 2017

One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions

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7 April 2017

A new vector for high-throughput, ligation-independent cloning encoding a tobacco etch virus protease cleavage site

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7 April 2017

Novel domains of the prokaryotic two-component signal transduction systems

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7 April 2017

Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase: a study of the EAL domain-containing RocR from Pseudomonas aeruginosa

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29 September 2017

Transient dimerization and conformational change of a BLUF protein: YcgF.

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29 September 2017

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29 September 2017

Allosteric control of cyclic di-GMP signaling

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29 September 2017

Mechanisms of cyclic-di-GMP signaling in bacteria

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29 September 2017

Analysis of FimX, a phosphodiesterase that governs twitching motility in Pseudomonas aeruginosa

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29 September 2017

Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP.

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29 September 2017

One-component systems dominate signal transduction in prokaryotes

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29 September 2017

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29 September 2017

Role of cyclic Di-GMP during el tor biotype Vibrio cholerae infection: characterization of the in vivo-induced cyclic Di-GMP phosphodiesterase CdpA.

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2 June 2018

The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in Yersinia pestis

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2 June 2018

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2 June 2018

Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation.

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21 January 2018

Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli.

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21 January 2018

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

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21 January 2018

The detection of sub-units within the crystallographic asymmetric unit

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21 January 2018

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

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21 January 2018

Short hydrogen bonds in photoactive yellow protein

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21 January 2018

Light induced structural changes of a full-length protein and its BLUF domain in YcgF(Blrp), a blue-light sensing protein that uses FAD (BLUF).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M808221200

21 January 2018

Influence of a joining helix on the BLUF domain of the YcgF photoreceptor from Escherichia coli

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21 January 2018

Cyclic diguanylic acid behaves as a host molecule for planar intercalators

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12 December 2020

based on heuristic

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Identifiers

10.1074/JBC.M808221200

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release_ldjtbs24dfbsffntb2vz7ac3lu

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24 November 2022

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