(Q27661142)

1

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Miguel Garcia-Diaz

2

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Rui-Zhe Zhou

3

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Lawrence F Povirk

4

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Thomas A Kunkel

Creative Commons Attribution-NonCommercial 2.5 Generic

5

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language of work or name

English

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publication date

September 2010

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published in

Nucleic Acids Research

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volume

38

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issue

16

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page(s)

5419-31

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copyright license

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Association of DNA polymerase mu (pol mu) with Ku and ligase IV: role for pol mu in end-joining double-strand break repair

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

PHENIX: building new software for automated crystallographic structure determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Improved methods for building protein models in electron density maps and the location of errors in these models

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

End-bridging is required for pol mu to efficiently promote repair of noncomplementary ends by nonhomologous end joining

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

A gradient of template dependence defines distinct biological roles for family X polymerases in nonhomologous end joining

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Implication of DNA polymerase lambda in alignment-based gap filling for nonhomologous DNA end joining in human nuclear extracts.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Immunoglobulin kappa light chain gene rearrangement is impaired in mice deficient for DNA polymerase mu

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Identification of an intrinsic 5'-deoxyribose-5-phosphate lyase activity in human DNA polymerase lambda: a possible role in base excision repair

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

The mechanism of human nonhomologous DNA end joining

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Nonoverlapping functions of DNA polymerases mu, lambda, and terminal deoxynucleotidyltransferase during immunoglobulin V(D)J recombination in vivo

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

DNA polymerase lambda mediates a back-up base excision repair activity in extracts of mouse embryonic fibroblasts

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Sibling rivalry: competition between Pol X family members in V(D)J recombination and general double strand break repair

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Structures of mismatch replication errors observed in a DNA polymerase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

A structural solution for the DNA polymerase lambda-dependent repair of DNA gaps with minimal homology

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938210

Minor groove interactions at the DNA polymerase beta active site modulate single-base deletion error rates

20 March 2017

1 reference

12 December 2020

The lyase activity of the DNA repair protein beta-polymerase protects from DNA-damage-induced cytotoxicity

1 reference

12 December 2020

DNA polymerase beta and mammalian base excision repair.

1 reference

12 December 2020

Human DNA polymerase lambda diverged in evolution from DNA polymerase beta toward specific Mn(++) dependence: a kinetic and thermodynamic study

1 reference

12 December 2020

The frameshift infidelity of human DNA polymerase lambda. Implications for function.

1 reference

12 December 2020

The efficiency and specificity of apurinic/apyrimidinic site bypass by human DNA polymerase eta and Sulfolobus solfataricus Dpo4.

1 reference

12 December 2020

DNA replication fidelity

1 reference

12 December 2020

A biochemically defined system for mammalian nonhomologous DNA end joining

1 reference

12 December 2020

A closed conformation for the Pol lambda catalytic cycle.

1 reference

12 December 2020

Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase

1 reference

12 December 2020

Mechanism of a genetic glissando: structural biology of indel mutations.

1 reference

12 December 2020

A specific loop in human DNA polymerase mu allows switching between creative and DNA-instructed synthesis

1 reference

12 December 2020

Phosphorylation in the serine/threonine 2609-2647 cluster promotes but is not essential for DNA-dependent protein kinase-mediated nonhomologous end joining in human whole-cell extracts

1 reference

12 December 2020

The X family portrait: structural insights into biological functions of X family polymerases.

1 reference

12 December 2020

Tolerance for 8-oxoguanine but not thymine glycol in alignment-based gap filling of partially complementary double-strand break ends by DNA polymerase lambda in human nuclear extracts.

1 reference

12 December 2020

Catalytic mechanism of human DNA polymerase lambda with Mg2+ and Mn2+ from ab initio quantum mechanical/molecular mechanical studies.

1 reference

12 December 2020

A role for DNA polymerase mu in the emerging DJH rearrangements of the postgastrulation mouse embryo.

1 reference

12 December 2020

Conferring a template-dependent polymerase activity to terminal deoxynucleotidyltransferase by mutations in the Loop1 region

1 reference

12 December 2020

Template strand scrunching during DNA gap repair synthesis by human polymerase lambda.

1 reference

12 December 2020

Limited terminal transferase in human DNA polymerase mu defines the required balance between accuracy and efficiency in NHEJ.

1 reference

12 December 2020

An 8-oxo-guanine repair pathway coordinated by MUTYH glycosylase and DNA polymerase lambda

1 reference

12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

1 reference

12 December 2020

Lack of N regions in antigen receptor variable region genes of TdT-deficient lymphocytes

1 reference

12 December 2020

Mice lacking TdT: mature animals with an immature lymphocyte repertoire

1 reference

12 December 2020

Analyzing fidelity of DNA polymerases.

1 reference

12 December 2020

Construction of a vector containing a site-specific DNA double-strand break with 3'-phosphoglycolate termini and analysis of the products of end-joining in CV-1 cells

1 reference

12 December 2020