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DNA intercalation without flipping in the specific ThaI-DNA complex
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Europe PubMed Central
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3025569
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14 February 2020
title
DNA intercalation without flipping in the specific ThaI-DNA complex
(English)
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Europe PubMed Central
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3025569
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14 February 2020
author
Małgorzata Firczuk
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1
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3025569
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14 February 2020
Marek Wojciechowski
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2
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3025569
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20861000%20AND%20SRC:MED&resulttype=core&format=json
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14 February 2020
Matthias Bochtler
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4
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3025569
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14 February 2020
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Honorata Czapinska
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3
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14 February 2020
language of work or name
English
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publication date
21 September 2010
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Europe PubMed Central
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3025569
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14 February 2020
published in
Nucleic Acids Research
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Europe PubMed Central
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3025569
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20861000%20AND%20SRC:MED&resulttype=core&format=json
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14 February 2020
volume
39
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Europe PubMed Central
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3025569
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14 February 2020
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2
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14 February 2020
page(s)
744-754
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Europe PubMed Central
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3025569
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14 February 2020
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Creative Commons Attribution-NonCommercial 2.5 Generic
start time
7 November 2016
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Methylation of either cytosine in the recognition sequence CGCG inhibits ThaI cleavage of DNA.
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3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
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2 June 2018
Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
2 June 2018
Grouping together highly diverged PD-(D/E)XK nucleases and identification of novel superfamily members using structure-guided alignment of sequence profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
2 June 2018
On the Divalent Metal Ion Dependence of DNA Cleavage by Restriction Endonucleases of the EcoRI Family
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
27 November 2018
Catalytic mechanism of DNA backbone cleavage by the restriction enzyme EcoRV: a quantum mechanical/molecular mechanical analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
27 November 2018
Crystal structures of type II restriction endonuclease EcoO109I and its complex with cognate DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
27 November 2018
An Asymmetric Complex of Restriction Endonuclease MspI on Its Palindromic DNA Recognition Site
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
27 November 2018
Identification of a PD-(D/E)XK-like domain with a novel configuration of the endonuclease active site in the methyl-directed restriction enzyme Mrr and its homologs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3025569
retrieved
27 November 2018
Metal-binding sites at the active site of restriction endonuclease BamHI can conform to a one-ion mechanism
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20861000
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Five-stranded beta-sheet sandwiched with two alpha-helices: a structural link between restriction endonucleases EcoRI and EcoRV
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20861000
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A sliding restriction enzyme pauses
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20861000
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Alteration of sequence specificity of the type II restriction endonuclease HincII through an indirect readout mechanism
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20861000
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKQ834
1 reference
stated in
Europe PubMed Central
PMCID
3025569
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20861000%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 February 2020
DBLP publication ID
journals/nar/FirczukWCB11
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
3025569
1 reference
stated in
Europe PubMed Central
PMCID
3025569
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20861000%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 February 2020
PubMed ID
20861000
1 reference
stated in
Europe PubMed Central
PMCID
3025569
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20861000%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 February 2020
ResearchGate publication ID
46403034
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