(Q27666587)

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The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4

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The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4 (English)

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protein structure

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5

object named as

Masaaki Kawano

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12

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Reimar Johne

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author name string

Peter S Shen

1

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Dirk Enderlein

2

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Christian D S Nelson

3

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Weston S Carter

4

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Li Xing

6

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Robert D Swenson

7

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Norman H Olson

8

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Timothy S Baker

9

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R Holland Cheng

10

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Walter J Atwood

11

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David M Belnap

13

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publication date

1 March 2011

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411

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1

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142-52

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Subunit interactions in bovine papillomavirus

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20 March 2017

Structural basis of GM1 ganglioside recognition by simian virus 40

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20 March 2017

Structure of recombinant capsids formed by the beta-annulus deletion mutant -- rCP (Delta48-59) of Sesbania mosaic virus

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20 March 2017

A very late viral protein triggers the lytic release of SV40

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20 March 2017

Ab initio random model method facilitates 3D reconstruction of icosahedral particles

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20 March 2017

Comparing phylogenetic codivergence between polyomaviruses and their hosts

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20 March 2017

Cryo-Electron Microscopy Reveals the Functional Organization of an Enveloped Virus, Semliki Forest Virus

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20 March 2017

Crystal structures of murine polyomavirus in complex with straight-chain and branched-chain sialyloligosaccharide receptor fragments

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20 March 2017

The structure of simian virus 40 refined at 3.1 A resolution

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20 March 2017

Clustal W and Clustal X version 2.0

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20 March 2017

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling

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20 March 2017

UCSF Chimera--a visualization system for exploratory research and analysis

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20 March 2017

The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins

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20 March 2017

Conserved features in papillomavirus and polyomavirus capsids

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20 March 2017

Bsoft: image processing and molecular modeling for electron microscopy

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7 April 2017

Caveolar endocytosis of simian virus 40 reveals a new two-step vesicular-transport pathway to the ER

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

7 April 2017

The random-model method enables ab initio 3D reconstruction of asymmetric particles and determination of particle symmetry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Calcium bridge triggers capsid disassembly in the cell entry process of simian virus 40.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Early events during BK virus entry and disassembly

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

VIPERdb2: an enhanced and web API enabled relational database for structural virology

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29 September 2017

A light and electron microscopic examination of budgerigar fledgling disease virus in tissue and in cell culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Papovavirus-like infection in budgerigars (Melopsittacus undulatus).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Polyomaviruses of birds: etiologic agents of inflammatory diseases in a tumor virus family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Mutational analysis of the carboxyl-terminal region of the SV40 major capsid protein VP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Phylogenomics and molecular evolution of polyomaviruses

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

Structure and assembly of a T=1 virus-like particle in BK polyomavirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Nuclear localization of avian polyomavirus structural protein VP1 is a prerequisite for the formation of virus-like particles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Analysis of minimal sequences on JC virus VP1 required for capsid assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Avian polyomavirus agnoprotein 1a is incorporated into the virus particle as a fourth structural protein, VP4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Agnoprotein 1a and agnoprotein 1b of avian polyomavirus are apoptotic inducers

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

JC virus enters human glial cells by clathrin-dependent receptor-mediated endocytosis.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Methods for reconstructing density maps of "single" particles from cryoelectron micrographs to subnanometer resolution.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Avian polyomavirus major capsid protein VP1 interacts with the minor capsid proteins and is transported into the cell nucleus but does not assemble into capsid-like particles when expressed in the baculovirus system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Interaction of polyomavirus internal protein VP2 with the major capsid protein VP1 and implications for participation of VP2 in viral entry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Three-dimensional hydrogen-bond geometry and probability information from a crystal survey

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Three-dimensional reconstruction of icosahedral particles--the uncommon line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Use of radial density plots to calibrate image magnification for frozen-hydrated specimens

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Structure of murine polyomavirus complexed with an oligosaccharide receptor fragment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Purification of recombinant budgerigar fledgling disease virus VP1 capsid protein and its ability for in vitro capsid assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Polyoma virus capsid structure at 22.5 Å resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Self-assembly of purified polyomavirus capsid protein VP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Establishment of a line of human fetal glial cells that supports JC virus multiplication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Reconstruction of the three-dimensional structure of simian virus 40 and visualization of the chromatin core

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

The capsid of small papova viruses contains 72 pentameric capsomeres: direct evidence from cryo-electron-microscopy of simian virus 40.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Dissociation of polyoma virus by the chelation of calcium ions found associated with purified virions

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

Characterization of components released by alkali disruption of simian virus 40

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

29 September 2017

A core-weighted fitting method for docking atomic structures into low-resolution maps: application to cryo-electron microscopy.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

Use of the baculovirus system to assemble polyomavirus capsid-like particles with different polyomavirus structural proteins: analysis of the recombinant assembled capsid-like particles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

The surface structure of polyoma virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

Three dimensional reconstructions of spherical viruses by fourier synthesis from electron micrographs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

A polyoma-like virus associated with an acute disease of fledgling budgerigars (Melopsittacus undulatus).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

Extension of JC virus host range to monkey cells by insertion of a simian virus 40 enhancer into the JC virus regulatory region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

Structure of simian virus 40 at 3.8-A resolution

1 reference

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2 June 2018

Inside polyomavirus at 25-A resolution

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

2 June 2018

Mortality due to polyomavirus infection in two nightjars (Caprimulgus europaeus).

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

27 November 2018

Avian polyomavirus mutants with deletions in the VP4-encoding region show deficiencies in capsid assembly and virus release, and have reduced infectivity in chicken

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

27 November 2018

Effects of the cowpea chlorotic mottle bromovirus beta-hexamer structure on virion assembly

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27 November 2018

Biophysical effect of amino acids on the prevention of protein aggregation

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27 November 2018

Molecular and biological characteristics of avian polyomaviruses: isolates from different species of birds indicate that avian polyomaviruses form a distinct subgenus within the polyomavirus genus

1 reference

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27 November 2018

Organ distribution of avian polyomavirus DNA and virus-neutralizing antibody titers in healthy adult budgerigars.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3057058

27 November 2018

A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy

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7 January 2021

A Generalized Inclusion Body Disease in the Budgerigar (Melopsittacus undulatus) Caused by a Papovavirus-Like Agent

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

A Viral Disease of Fledgling Budgerigars

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

Dynamics of EF-G interaction with the ribosome explored by classification of a heterogeneous cryo-EM dataset

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

Avian polyomavirus infection and disease in a green aracaris (Pteroglossus viridis)

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.12.005

7 January 2021

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10.1016/J.VIROL.2010.12.005

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