(Q27674766)

English

The crystal structure of human telomeric DNA complexed with berberine: an interesting case of stacked ligand to G-tetrad ratio higher than 1:1

scientific article

In more languages

Statements

scholarly article

0 references

The crystal structure of human telomeric DNA complexed with berberine: an interesting case of stacked ligand to G-tetrad ratio higher than 1:1 (English)

0 references

crystal structure

0 references

Marta Ferraroni

2

object named as

Marta Ferraroni

0 references

Anna Rita Bilia

object named as

Anna Rita Bilia

3

0 references

Carla Bazzicalupi

object named as

Carla Bazzicalupi

1

0 references

object named as

Paola Gratteri

5

0 references

author name string

Francesca Scheggi

4

0 references

language of work or name

0 references

publication date

7 January 2013

0 references

Nucleic Acids Research

0 references

41

0 references

632-8

0 references

1

0 references

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Structural basis for telomeric G-quadruplex targeting by naphthalene diimide ligands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Molecular basis of structure-activity relationships between salphen metal complexes and human telomeric DNA quadruplexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Structure of human telomeric DNA in crowded solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

X-Ray diffraction analyses of the natural isoquinoline alkaloids Berberine and Sanguinarine complexed with double helix DNA d(CGTACG)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Structural basis of telomeric RNA quadruplex--acridine ligand recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Structural basis of DNA quadruplex recognition by an acridine drug

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Structural basis for binding of porphyrin to human telomeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Drug recognition and stabilisation of the parallel-stranded DNA quadruplex d(TTAGGGT)4 containing the human telomeric repeat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Structure of the first parallel DNA quadruplex-drug complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Crystal structure of parallel quadruplexes from human telomeric DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Features and development of Coot

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

The CCP4 suite: programs for protein crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

20 March 2017

Insight into G-DNA structural polymorphism and folding from sequence and loop connectivity through free energy analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Polymorphic nucleic Acid binding of bioactive isoquinoline alkaloids and their role in cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Isoquinoline alkaloids and their binding with DNA: calorimetry and thermal analysis applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Interaction of metal complexes with G-quadruplex DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Human telomeric G-quadruplex: the current status of telomeric G-quadruplexes as therapeutic targets in human cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Human telomeric G-quadruplex: structures of DNA and RNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Synthesis and evaluation of 9-O-substituted berberine derivatives containing aza-aromatic terminal group as highly selective telomeric G-quadruplex stabilizing ligands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

9-N-Substituted berberine derivatives: stabilization of G-quadruplex DNA and down-regulation of oncogene c-myc

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

A hitchhiker's guide to G-quadruplex ligands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

G-quadruplexes: targets in anticancer drug design.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Crystallographic studies of quadruplex nucleic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

9-Substituted berberine derivatives as G-quadruplex stabilizing ligands in telomeric DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Molecular aspects on the interaction of protoberberine, benzophenanthridine, and aristolochia group of alkaloids with nucleic acid structures and biological perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

The anti-inflammatory potential of berberine in vitro and in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

29 September 2017

Interaction of human telomeric DNA with N-methyl mesoporphyrin IX.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

2 June 2018

The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

2 June 2018

G-quadruplex nucleic acids as therapeutic targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3592469

2 June 2018

Inhibitory effect of isoquinoline alkaloids on movement of second-stage larvae of Toxocara canis

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Natural and synthetic G-quadruplex interactive berberine derivatives.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

MOLREP: an Automated Program for Molecular Replacement

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Mercury CSD 2.0– new features for the visualization and investigation of crystal structures

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Following G-quadruplex formation by its intrinsic fluorescence.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Shedding Light on the Interaction between TMPyP4 and Human Telomeric Quadruplexes

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Spectroscopic, Molecular Modeling, and NMR-Spectroscopic Investigation of the Binding Mode of the Natural Alkaloids Berberine and Sanguinarine to Human Telomeric G-Quadruplex DNA

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

G-Quadruplexes from Human Telomeric DNA: How Many Conformations in PEG Containing Solutions?

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Binding properties of human telomeric quadruplex multimers: A new route for drug design

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1001

21 January 2018

Binding of berberine to human telomeric quadruplex - spectroscopic, calorimetric and molecular modeling studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/23104378

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interaction of berberine, palmatine, coralyne, and sanguinarine to quadruplex DNA: a comparative spectroscopic and calorimetric study

1 reference

https://pubmed.ncbi.nlm.nih.gov/23104378

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Anthelmintic activity of berberine hydrochloride against Syphacia obvelata in mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/23104378

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic and thermodynamic control of G-quadruplex folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/23104378

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKS1001

0 references

0 references

0 references

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q27674766&oldid=1866298203"