(Q27676467)

23 June 2017

title

Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography (English)

1 reference

23 June 2017

main subject

X-ray crystallography

0 references

1 reference

7

Hyotcherl Ihee

1 reference

23 June 2017

Yang Ouk Jung

1

1 reference

23 June 2017

Jae Hyuk Lee

2

1 reference

23 June 2017

Joonghan Kim

3

1 reference

23 June 2017

Marius Schmidt

4

1 reference

23 June 2017

Keith Moffat

5

1 reference

23 June 2017

Vukica Srajer

6

1 reference

23 June 2017

publication date

3 February 2013

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23 June 2017

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23 June 2017

volume

5

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23 June 2017

issue

3

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23 June 2017

page(s)

212-220

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Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography

23 June 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography

20 March 2017

1 reference

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20 March 2017

A short history of SHELX

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Structure at 0.85 A resolution of an early protein photocycle intermediate

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Tracking the excited-state time evolution of the visual pigment with multiconfigurational quantum chemistry

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Structural evolution of the chromophore in the primary stages of trans/cis isomerization in photoactive yellow protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Structure and mechanism of the reversible photoswitch of a fluorescent protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Structure, initial excited-state relaxation, and energy storage of rhodopsin resolved at the multiconfigurational perturbation theory level

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Stark Spectroscopy on Photoactive Yellow Protein, E46Q, and a Nonisomerizing Derivative, Probes Photo-Induced Charge Motion

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Application of singular value decomposition to the analysis of time-resolved macromolecular x-ray data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Gas-phase photochemistry of the photoactive yellow protein chromophore trans-p-coumaric acid.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Themodynamic and transport properties of intermediate states of the photocyclic reaction of photoactive yellow protein.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Primary photoreaction of photoactive yellow protein studied by subpicosecond-nanosecond spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Structure of the I1 early intermediate of photoactive yellow protein by FTIR spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Early intermediates in the photocycle of the Glu46Gln mutant of photoactive yellow protein: femtosecond spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

The case of medium-dependent dual mechanisms for photoisomerization: one-bond-flip and hula-twist

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

New photocycle intermediates in the photoactive yellow protein from Ectothiorhodospira halophila: picosecond transient absorption spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

The use of matrix methods in the modeling of spectroscopic data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

The primary process of vision and the structure of bathorhodopsin: a mechanism for photoisomerization of polyenes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Hydrogen bonding controls excited-state decay of the photoactive yellow protein chromophore

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Glu46 donates a proton to the 4-hydroxycinnamate anion chromophore during the photocycle of photoactive yellow protein.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Photoreaction cycle of photoactive yellow protein from Ectothiorhodospira halophila studied by low-temperature spectroscopy.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Measurement and global analysis of the absorbance changes in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Bicycle-pedal isomerization in a rhodopsin chromophore model

2 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Initial steps of signal generation in photoactive yellow protein revealed with femtosecond mid-infrared spectroscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Initial events in the photocycle of photoactive yellow protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Structural heterogeneity of cryotrapped intermediates in the bacterial blue light photoreceptor, photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Low-temperature Fourier transform infrared spectroscopy of photoactive yellow protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Resonance Raman evidence for two conformations involved in the L intermediate of photoactive yellow protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

A structural pathway for signaling in the E46Q mutant of photoactive yellow protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Watching a protein as it functions with 150-ps time-resolved x-ray crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Protein structural dynamics of photoactive yellow protein in solution revealed by pump-probe X-ray solution scattering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Photoactivation of the photoactive yellow protein: why photon absorption triggers a trans-to-cis Isomerization of the chromophore in the protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCHEM.1565

Structure of photoactive yellow protein (PYP) E46Q mutant at 1.2 A resolution suggests how Glu46 controls the spectroscopic and kinetic characteristics of PYP.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3579544

Mechanistic pathways for the photoisomerization reaction of the anchored, tethered chromophore of the photoactive yellow protein and its mutants

27 November 2018

1 reference

12 December 2020

Mechanisms of photoisomerization of polyenes in confined media: from organic glasses to protein binding cavities

1 reference

12 December 2020

Ultrafast photoisomerization of photoactive yellow protein chromophore analogues in solution: influence of the protonation state

1 reference

12 December 2020

Ultrafast light-induced response of photoactive yellow protein chromophore analogues

1 reference

12 December 2020

Low-Temperature Photochemistry of Previtamin D: A Hula-Twist Isomerization of a Triene

1 reference

12 December 2020

Identifiers

DOI

10.1038/NCHEM.1565

1 reference

Dimensions Publication ID

23 June 2017

1045839823

0 references

PMC publication ID

3579544

0 references

1 reference