(Q27677341)

English

Insight to the Interaction of the Dihydrolipoamide Acetyltransferase (E2) Core with the Peripheral Components in the Escherichia coli Pyruvate Dehydrogenase Complex via Multifaceted Structural Approaches

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23580650%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Insight to the interaction of the dihydrolipoamide acetyltransferase (E2) core with the peripheral components in the Escherichia coli pyruvate dehydrogenase complex via multifaceted structural approaches (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23580650%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

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Escherichia coli

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2

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28 February 2020

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Krishnamoorthy Chandrasekhar

1

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28 February 2020

Palaniappa Arjunan

3

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28 February 2020

Martin Sax

4

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28 February 2020

Yun-Hee Park

5

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28 February 2020

Natalia S Nemeria

6

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28 February 2020

Sowmini Kumaran

7

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28 February 2020

Jaeyoung Song

8

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28 February 2020

Frank Jordan

9

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28 February 2020

William Furey

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28 February 2020

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11 April 2013

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28 February 2020

Journal of Biological Chemistry

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28 February 2020

288

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28 February 2020

21

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28 February 2020

15402-15417

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28 February 2020

Structural and Thermodynamic Basis for Weak Interactions between Dihydrolipoamide Dehydrogenase and Subunit-binding Domain of the Branched-chain -Ketoacid Dehydrogenase Complex

1 reference

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20 March 2017

PHENIX: a comprehensive Python-based system for macromolecular structure solution

1 reference

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20 March 2017

Communication between Thiamin Cofactors in the Escherichia coli Pyruvate Dehydrogenase Complex E1 Component Active Centers: EVIDENCE FOR A"DIRECT PATHWAY"BETWEEN THE 4'-AMINOPYRIMIDINE N1' ATOMS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

A dynamic loop at the active center of the Escherichia coli pyruvate dehydrogenase complex E1 component modulates substrate utilization and chemical communication with the E2 component

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Structural insight into interactions between dihydrolipoamide dehydrogenase (E3) and E3 binding protein of human pyruvate dehydrogenase complex

1 reference

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20 March 2017

Structure of the pyruvate dehydrogenase multienzyme complex E1 component from Escherichia coli at 1.85 A resolution

1 reference

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20 March 2017

Interaction between the lipoamide-containing H-protein and the lipoamide dehydrogenase (L-protein) of the glycine decarboxylase multienzyme system 2. Crystal structures of H- and L-proteins

1 reference

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20 March 2017

Crystal structure of the truncated cubic core component of the Escherichia coli 2-oxoglutarate dehydrogenase multienzyme complex

1 reference

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20 March 2017

Crystal structure of eucaryotic E3, lipoamide dehydrogenase from yeast

1 reference

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20 March 2017

Molecular structure of the lipoamide dehydrogenase domain of a surface antigen from Neisseria meningitidis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Three-dimensional structure of lipoamide dehydrogenase from Pseudomonas fluorescens at 2.8 A resolution. Analysis of redox and thermostability properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation

1 reference

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20 March 2017

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Refined crystal structure of lipoamide dehydrogenase from Azotobacter vinelandii at 2.2 A resolution. A comparison with the structure of glutathione reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

The refined crystal structure of Pseudomonas putida lipoamide dehydrogenase complexed with NAD+ at 2.45 A resolution

1 reference

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20 March 2017

Phasercrystallographic software

1 reference

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20 March 2017

Coot: model-building tools for molecular graphics

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20 March 2017

MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes

1 reference

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20 March 2017

The finer things in X-ray diffraction data collection

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

29 September 2017

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

1 reference

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20 March 2017

Solvent content of protein crystals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

How dihydrolipoamide dehydrogenase-binding protein binds dihydrolipoamide dehydrogenase in the human pyruvate dehydrogenase complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Crystal structure of human dihydrolipoamide dehydrogenase: NAD+/NADH binding and the structural basis of disease-causing mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Asparagine-473 residue is important to the efficient function of human dihydrolipoamide dehydrogenase

1 reference

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20 March 2017

Domains, motifs, and linkers in 2-oxo acid dehydrogenase multienzyme complexes: a paradigm in the design of a multifunctional protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Atomic structure of the cubic core of the pyruvate dehydrogenase multienzyme complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Crystal structure and functional analysis of lipoamide dehydrogenase from Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

20 March 2017

Cyclic AMP-induced conformational changes in mycobacterial protein acetyltransferases

1 reference

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29 September 2017

Interchain acetyl transfer in the E2 component of bacterial pyruvate dehydrogenase suggests a model with different roles for each chain in a trimer of the homooligomeric component

1 reference

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29 September 2017

Semi-automated data processing of hydrogen exchange mass spectra using HX-Express

1 reference

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29 September 2017

Identification and characterization of EX1 kinetics in H/D exchange mass spectrometry by peak width analysis

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29 September 2017

Structural determinants of enzyme binding affinity: the E1 component of pyruvate dehydrogenase from Escherichia coli in complex with the inhibitor thiamin thiazolone diphosphate.

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29 September 2017

Inhibition of the Escherichia coli pyruvate dehydrogenase complex E1 subunit and its tyrosine 177 variants by thiamin 2-thiazolone and thiamin 2-thiothiazolone diphosphates. Evidence for reversible tight-binding inhibition

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29 September 2017

Alpha-keto acid dehydrogenase complexes. 8. Comparison of dihydrolipoyl dehydrogenases from pyruvate and alpha-ketoglutarate dehydrogenase complexes of Escherichia coli

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29 September 2017

Molecular biology and biochemistry of pyruvate dehydrogenase complexes.

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29 September 2017

The lpd gene product functions as the L protein in the Escherichia coli glycine cleavage enzyme system

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29 September 2017

Subunit structure of dihydrolipoyl transacetylase component of pyruvate dehydrogenase complex from Escherichia coli

1 reference

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29 September 2017

The Lipoamide Dehydrogenase Component of the 2-Oxo Acid Dehydrogenase Multienzyme Complexes of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

29 September 2017

Interaction of E1 and E3 components with the core proteins of the human pyruvate dehydrogenase complex

1 reference

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2 June 2018

Amino-terminal residues 1-45 of the Escherichia coli pyruvate dehydrogenase complex E1 subunit interact with the E2 subunit and are required for activity of the complex but not for reductive acetylation of the E2 subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

2 June 2018

Effect of substitutions in the thiamin diphosphate-magnesium fold on the activation of the pyruvate dehydrogenase complex from Escherichia coli by cofactors and substrate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

2 June 2018

Structure of glutathione reductase from Escherichia coli at 1.86 A resolution: comparison with the enzyme from human erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

2 June 2018

Dihydrolipoamide dehydrogenase from halophilic archaebacteria

1 reference

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2 June 2018

Dihydrolipoamide dehydrogenase from Trypanosoma brucei. Characterization and cellular location

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

2 June 2018

Isolation and characterization of lipoylated and unlipoylated domains of the E2p subunit of the pyruvate dehydrogenase complex of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663558

2 June 2018

The pyruvate dehydrogenase complex of Escherichia coli K12. Nucleotide sequence encoding the dihydrolipoamide acetyltransferase component.

1 reference

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21 January 2018

Expression and purification of the dihydrolipoamide acetyltransferase and dihydrolipoamide dehydrogenase subunits of the Escherichia coli pyruvate dehydrogenase multienzyme complex: a mass spectrometric assay for reductive acetylation of dihydrolipo

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.466789

21 January 2018

A thiamin-bound, pre-decarboxylation reaction intermediate analogue in the pyruvate dehydrogenase E1 subunit induces large scale disorder-to-order transformations in the enzyme and reveals novel structural features in the covalently bound adduct

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.466789

21 January 2018

Active-site changes in the pyruvate dehydrogenase multienzyme complex E1 apoenzyme component from Escherichia coli observed at 2.32 A resolution.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.466789

21 January 2018

Refined crystal structure of lipoamide dehydrogenase from Azotobacter vinelandii at 2.2 Å resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.466789

21 January 2018

Structural bases for the specific interactions between the E2 and E3 components of the Thermus thermophilus 2-oxo acid dehydrogenase complexes.

1 reference

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21 January 2018

Specificity of immobilized porcine pepsin in H/D exchange compatible conditions

1 reference

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21 January 2018

Interaction of the E2 and E3 components of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus. Use of a truncated protein domain in NMR spectroscopy.

1 reference

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21 January 2018

A Suite of Triple Resonance NMR Experiments for the Backbone Assignment of 15N, 13C, 2H Labeled Proteins with High Sensitivity

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21 January 2018

An Efficient and Inexpensive Refrigerated LC System for H/D Exchange Mass Spectrometry

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21 January 2018

Structural relationship between glutathione reductase and lipoamide dehydrogenase

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

X-ray structure of lipoamide dehydrogenase from Azotobacter vinelandii determined by a combination of molecular and isomorphous replacement techniques

1 reference

https://pubmed.ncbi.nlm.nih.gov/23580650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic study of the six cysteines of the E1 subunit of the pyruvate dehydrogenase multienzyme complex from Escherichia coli: none is essential for activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/23580650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and sequence analysis of the pyruvate and 2-oxoglutarate dehydrogenase complex genes of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23580650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M113.466789

2 references

Consolidated OpenCitations Corpus – April 2017

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Europe PubMed Central

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28 February 2020

OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23580650%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23580650%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

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