(Q27678489)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

title

Cavities determine the pressure unfolding of proteins (English)

1 reference

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28 January 2020

1

1 reference

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28 January 2020

Douglas R Norberto

3

1 reference

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28 January 2020

Philippe Barthe

4

1 reference

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28 January 2020

Christian Roumestand

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

Catherine A. Royer

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

7

Angel E Garcia

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

author name string

Jose A Caro

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

Jamie L Schlessman

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

Bertrand E García-Moreno

8

1 reference

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28 January 2020

language of work or name

English

0 references

publication date

10 April 2012

1 reference

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28 January 2020

number of pages

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

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28 January 2020

volume

109

1 reference

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28 January 2020

issue

18

1 reference

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28 January 2020

page(s)

6945-6950

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

Importance of the C-terminal loop L137-S141 for the folding and folding stability of staphylococcal nuclease

28 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

High Apparent Dielectric Constant Inside a Protein Reflects Structural Reorganization Coupled to the Ionization of an Internal Asp

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

NMR Structure of a Stable “OB-fold” Sub-domain Isolated from Staphylococcal Nuclease

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Evidence for a molten globule-like transition state in protein folding from determination of activation volumes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Size and sequence and the volume change of protein folding

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The behavior of the hydrophobic effect under pressure and protein denaturation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Computing the stability diagram of the Trp-cage miniprotein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Structural and thermodynamic characterization of T4 lysozyme mutants and the contribution of internal cavities to pressure denaturation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Fast procedure for reconstruction of full-atom protein models from reduced representations.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Water penetration in the low and high pressure native states of ubiquitin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Partially folded states of staphylococcal nuclease highlight the conserved structural hierarchy of OB-fold proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Folding kinetics of staphylococcal nuclease studied by tryptophan engineering and rapid mixing methods

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The use of high-pressure nuclear magnetic resonance to study protein folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Cooperative water filling of a nonpolar protein cavity observed by high-pressure crystallography and simulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Early events during folding of wild-type staphylococcal nuclease and a single-tryptophan variant studied by ultrarapid mixing.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Multiple parallel-pathway folding of proline-free Staphylococcal nuclease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Dissociation of amyloid fibrils of alpha-synuclein and transthyretin by pressure reveals their reversible nature and the formation of water-excluded cavities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

High apparent dielectric constants in the interior of a protein reflect water penetration

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Interactions between subdomains in the partially folded state of staphylococcal nuclease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Probing the contribution of internal cavities to the volume change of protein unfolding under pressure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The kinetic basis for the stabilization of staphylococcal nuclease by xylose

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Testing the correlation between delta A and delta V of protein unfolding using m value mutants of staphylococcal nuclease.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Staphylococcal nuclease folding intermediate characterized by hydrogen exchange and NMR spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The effect of high pressure upon proteins and other biomolecules

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Temperature dependence of the hydrophobic interaction in protein folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Stability of protein structure and hydrophobic interaction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Nonlocal interactions are responsible for tertiary structure formation in staphylococcal nuclease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

The foldon substructure of staphylococcal nuclease

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Local stability and dynamics of apocytochrome b562 examined by the dependence of hydrogen exchange on hydrostatic pressure

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Experimental measurement of the effective dielectric in the hydrophobic core of a protein.

2 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

McVol - a program for calculating protein volumes and identifying cavities by a Monte Carlo algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Picosecond protein dynamics: the origin of the time-dependent spectral shift in the fluorescence of the single Trp in the protein GB1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Pressure perturbation calorimetry: a new technique provides surprising results on the effects of co-solvents on protein solvation and unfolding behaviour

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Universal convergence of the specific volume changes of globular proteins upon unfolding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Pressure perturbation calorimetric studies of the solvation properties and the thermal unfolding of proteins in solution—experiments and theoretical interpretation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Studying pressure denaturation of a protein by molecular dynamics simulations.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344970

Thermodynamics of unfolding

27 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1200915109

Probing force-induced unfolding intermediates of a single staphylococcal nuclease molecule and the effect of ligand binding

21 January 2018

1 reference

12 December 2020

Origins of pressure-induced protein transitions

1 reference

12 December 2020

Filling a cavity dramatically increases pressure stability of the c-Myb R2 subdomain

1 reference

12 December 2020

Molecular dynamics simulations of pressure effects on hydrophobic interactions

1 reference

12 December 2020

Thermodynamics of protein denaturation. Effect of pressure on the denaturation on ribonuclease A

1 reference

12 December 2020

Pressure perturbation calorimetry of unfolded proteins

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1200915109

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

ADS bibcode

2012PNAS..109.6945R

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

PubMed publication ID

22496593

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22496593%20AND%20SRC:MED&resulttype=core&format=json