(Q27680830)

Magnus Andersson

1

0 references

Pontus Gourdon

Pontus Gourdon

9

0 references

Lisbeth Birk Møller

Lisbeth Birk Møller

6

0 references

Stephen H. White

Stephen H White

7

0 references

author name string

Daniel Mattle

2

0 references

Oleg Sitsel

3

0 references

Tetyana Klymchuk

4

0 references

Anna Marie Nielsen

Nature Structural & Molecular Biology

5

0 references

publication date

January 2014

0 references

published in

0 references

volume

21

0 references

issue

1

0 references

page(s)

43-8

0 references

describes a project that uses

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3904665/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Crystal structure of a copper-transporting PIB-type ATPase

1 reference

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Structure and Metal Loading of a Soluble Periplasm Cuproprotein

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

PHENIX: a comprehensive Python-based system for macromolecular structure solution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The structural basis of calcium transport by the calcium pump

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Structural changes in the calcium pump accompanying the dissociation of calcium

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 A resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

NIH Image to ImageJ: 25 years of image analysis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Phasercrystallographic software

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Improved R-factors for diffraction data analysis in macromolecular crystallography

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

VMD: visual molecular dynamics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Biology, structure and mechanism of P-type ATPases

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Isolation of a candidate gene for Menkes disease and evidence that it encodes a copper-transporting ATPase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

CtpV: a putative copper exporter required for full virulence of Mycobacterium tuberculosis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The sarcolipin-bound calcium pump stabilizes calcium sites exposed to the cytoplasm

20 March 2017

1 reference

Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state

22 April 2017

1 reference

Revised effective ionic radii and systematic studies of interatomic distances in halides and chalcogenides

22 April 2017

1 reference

Scalable molecular dynamics with NAMD

22 April 2017

1 reference

Comparison of simple potential functions for simulating liquid water

22 April 2017

1 reference

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

22 April 2017

1 reference

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

22 April 2017

1 reference

Canonical dynamics: Equilibrium phase-space distributions

22 April 2017

2 references

22 April 2017

Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

7 April 2017

1 reference

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

CAVER: a new tool to explore routes from protein clefts, pockets and cavities

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

OPM: orientations of proteins in membranes database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6

7 April 2017

1 reference

On allosteric modulation of P-type Cu(+)-ATPases

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Copper at the front line of the host-pathogen battle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Distinctive features of catalytic and transport mechanisms in mammalian sarco-endoplasmic reticulum Ca2+ ATPase (SERCA) and Cu+ (ATP7A/B) ATPases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The lumenal loop Met672-Pro707 of copper-transporting ATPase ATP7A binds metals and facilitates copper release from the intramembrane sites

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The transport mechanism of bacterial Cu+-ATPases: distinct efflux rates adapted to different function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

ATP dependent charge movement in ATP7B Cu+-ATPase is demonstrated by pre-steady state electrical measurements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Identification of the third Na+ site and the sequence of extracellular binding events in the glutamate transporter

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The sarcoplasmic Ca2+-ATPase: design of a perfect chemi-osmotic pump

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

CtpA, a copper-translocating P-type ATPase involved in the biogenesis of multiple copper-requiring enzymes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

CHARMM-GUI Membrane Builder for mixed bilayers and its application to yeast membranes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Re-refinement from deposited X-ray data can deliver improved models for most PDB entries

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Biochemical aspects of active transport

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Coarse-grained simulation: a high-throughput computational approach to membrane proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Buried water molecules in helical transmembrane proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Structure and mechanism of ABC transporter proteins.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The structure and function of heavy metal transport P1B-ATPases.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Phosphoryl transfer and calcium ion occlusion in the calcium pump

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

The Wilson disease gene is a putative copper transporting P-type ATPase similar to the Menkes gene

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Organization of P-type ATPases: significance of structural diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Simple Allosteric Model for Membrane Pumps

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Structure of the two transmembrane Cu+ transport sites of the Cu+ -ATPases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Intermediate phosphorylation reactions in the mechanism of ATP utilization by the copper ATPase (CopA) of Thermotoga maritima

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3904665

Crystal structure of the calcium pump with a bound ATP analogue

2 June 2018

1 reference

Dephosphorylation of the calcium pump coupled to counterion occlusion

21 January 2018

1 reference

Structural models of the human copper P-type ATPases ATP7A and ATP7B.

21 January 2018

1 reference

Neurological disease mutations compromise a C-terminal ion pathway in the Na(+)/K(+)-ATPase.

21 January 2018

1 reference

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

A new force field for simulating phosphatidylcholine bilayers

21 January 2018

1 reference

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

1 reference

HiLiDe—Systematic Approach to Membrane Protein Crystallization in Lipid and Detergent

21 January 2018

1 reference

Uptake of monoaromatic hydrocarbons during biodegradation by FadL channel-mediated lateral diffusion

21 January 2018

1 reference

Control of copper homeostasis in Escherichia coli by a P-type ATPase, CopA, and a MerR-like transcriptional activator, CopR

21 January 2018

1 reference

Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models

31 March 2020

1 reference

A unified formulation of the constant temperature molecular dynamics methods

31 March 2020

1 reference

Polymorphic transitions in single crystals: A new molecular dynamics method

31 March 2020

1 reference

Activation by adenosine triphosphate in the phosphorylation kinetics of sodium and potassium ion transport adenosine triphosphatase

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24317491

12 December 2020

inferred from PubMed ID database lookup

Microdetermination of inorganic phosphate, phospholipids, and total phosphate in biologic materials

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24317491

12 December 2020

inferred from PubMed ID database lookup

A smooth particle mesh Ewald method

1 reference

7 January 2021