(Q27681683)

25 June 2017

title

Structural and computational studies of the Staphylococcus aureus sortase B-substrate complex reveal a substrate-stabilized oxyanion hole (English)

1 reference

25 June 2017

0 references

Staphylococcus aureus

1 reference

9

J Andrew McCammon

1 reference

25 June 2017

10

Robert T Clubb

1 reference

25 June 2017

Alex W Jacobitz

1

1 reference

25 June 2017

Jeff Wereszczynski

2

1 reference

25 June 2017

Sung Wook Yi

3

1 reference

25 June 2017

Brendan R Amer

4

1 reference

25 June 2017

Grace L Huang

5

1 reference

25 June 2017

Angelyn V Nguyen

6

1 reference

25 June 2017

Michael R Sawaya

7

1 reference

25 June 2017

Michael E Jung

8

1 reference

25 June 2017

language of work or name

English

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publication date

11 February 2014

1 reference

Journal of Biological Chemistry

25 June 2017

published in

1 reference

25 June 2017

volume

289

1 reference

25 June 2017

issue

13

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25 June 2017

page(s)

8891-8902

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Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER

25 June 2017

cites work

1 reference

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Structural Differences between the Streptococcus agalactiae Housekeeping and Pilus-Specific Sortases: SrtA and SrtC1

20 March 2017

1 reference

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The Sortase A Enzyme That Attaches Proteins to the Cell Wall of Bacillus anthracis Contains an Unusual Active Site Architecture

20 March 2017

1 reference

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Improved side-chain torsion potentials for the Amber ff99SB protein force field

20 March 2017

1 reference

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The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized

20 March 2017

1 reference

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Crystal structure of Streptococcus pyogenes sortase A: implications for sortase mechanism

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Structure of sortase, the transpeptidase that anchors proteins to the cell wall of Staphylococcus aureus

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Linking Crystallographic Model and Data Quality

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Features and development of Coot

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Phasercrystallographic software

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Scalable molecular dynamics with NAMD

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

On the size of the active site in proteases. I. Papain

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Development and testing of a general amber force field

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Automatic atom type and bond type perception in molecular mechanical calculations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Better models by discarding data?

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sortase enzymes in Gram-positive bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Directed evolution of sortase A mutants with altered substrate selectivity profiles

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Making and breaking peptide bonds: protein engineering using sortase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sortase transpeptidases: insights into mechanism, substrate specificity, and inhibition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sortase-mediated protein ligation: an emerging biotechnology tool for protein modification and immobilisation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sortase-mediated ligation: a gift from Gram-positive bacteria to protein engineering.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Mutagenesis studies of substrate recognition and catalysis in the sortase A transpeptidase from Staphylococcus aureus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Surface protein IsdC and Sortase B are required for heme-iron scavenging of Bacillus anthracis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Iron acquisition and transport in Staphylococcus aureus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Staphylococcus aureus Sortase A transpeptidase. Calcium promotes sorting signal binding by altering the mobility and structure of an active site loop.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Anchor structure of staphylococcal surface proteins. V. Anchor structure of the sortase B substrate IsdC.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Direct phase determination by entropy maximization and likelihood ranking: status report and perspectives

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Structures of sortase B from Staphylococcus aureus and Bacillus anthracis reveal catalytic amino acid triad in the active site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Analysis of the substrate specificity of the Staphylococcus aureus sortase transpeptidase SrtA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Further evidence that a cell wall precursor [C(55)-MurNAc-(peptide)-GlcNAc] serves as an acceptor in a sorting reaction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

An iron-regulated sortase anchors a class of surface protein during Staphylococcus aureus pathogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sortase-catalysed anchoring of surface proteins to the cell wall of Staphylococcus aureus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Staphylococcus aureus sortase mutants defective in the display of surface proteins and in the pathogenesis of animal infections

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Surface proteins of gram-positive bacteria and mechanisms of their targeting to the cell wall envelope

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Structure of the cell wall anchor of surface proteins in Staphylococcus aureus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Calculation of Free Energy Landscape in Multi-Dimensions with Hamiltonian-Exchange Umbrella Sampling on Petascale Supercomputer.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Sorting of protein a to the staphylococcal cell wall

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979406

Effect of srtA and srtB gene expression on the virulence of Staphylococcus aureus in animal models of infection

2 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Staphylococcus aureus sortase transpeptidase SrtA: insight into the kinetic mechanism and evidence for a reverse protonation catalytic mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Kinetic Mechanism of Staphylococcus aureus Sortase SrtA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Anchoring of surface proteins to the cell wall of Staphylococcus aureus. III. Lipid II is an in vivo peptidoglycan substrate for sortase-catalyzed surface protein anchoring

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Passage of heme-iron across the envelope of Staphylococcus aureus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Anchoring of surface proteins to the cell wall of Staphylococcus aureus. Cysteine 184 and histidine 120 of sortase form a thiolate-imidazolium ion pair for catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Localization and mutagenesis of the sorting signal binding site on sortase A from Staphylococcus aureus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Anchoring of surface proteins to the cell wall of Staphylococcus aureus. A conserved arginine residue is required for efficient catalysis of sortase A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Synthesis of (2R,3S) 3-amino-4-mercapto-2-butanol, a threonine analogue for covalent inhibition of sortases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Development of a high-performance liquid chromatography assay and revision of kinetic parameters for the Staphylococcus aureus sortase transpeptidase SrtA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

A fast SHAKE algorithm to solve distance constraint equations for small molecules in molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Engineering the substrate specificity of Staphylococcus aureus Sortase A. The beta6/beta7 loop from SrtB confers NPQTN recognition to SrtA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

The Listeria monocytogenes sortase-B recognizes varied amino acids at position 2 of the sorting motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Crystal structure of Escherichia coli penicillin-binding protein 5 bound to a tripeptide boronic acid inhibitor: a role for Ser-110 in deacylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Sortase from Staphylococcus aureus does not contain a thiolate-imidazolium ion pair in its active site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M113.509273

Catalytic mechanism and roles of Arg197 and Thr183 in the Staphylococcus aureus sortase A enzyme

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24519933

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mutational analysis of active site residues in the Staphylococcus aureus transpeptidase SrtA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24519933

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M113.509273

1 reference

25 June 2017

0 references

1 reference