(Q27760312)

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Lactate dehydrogenase from the hyperthermophilic bacterium thermotoga maritima: the crystal structure at 2.1 A resolution reveals strategies for intrinsic protein stabilization

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Lactate dehydrogenase from the hyperthermophilic bacterium thermotoga maritima: the crystal structure at 2.1 A resolution reveals strategies for intrinsic protein stabilization (English)

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crystal structure

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protein structure

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based on heuristic

inferred from title

Thermotoga maritima

object named as

thermotoga maritima

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inferred from title

author name string

G Auerbach

1

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R Ostendorp

2

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L Prade

3

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I Korndörfer

4

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T Dams

5

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R Huber

6

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R Jaenicke

7

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publication date

15 June 1998

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6

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769-81

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6

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Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C

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Octameric enolase from the hyperthermophilic bacterium Thermotoga maritima: purification, characterization, and image processing

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Glutamate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima: molecular characterization and phylogenetic implications.

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Extremely thermostable D-glyceraldehyde-3-phosphate dehydrogenase from the eubacterium Thermotoga maritima

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Complete amino-acid sequence of glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic eubacterium Thermotoga maritima

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Functional expression of D-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic eubacterium Thermotoga maritima in Escherichia coli. Authenticity and kinetic properties of the recombinant enzyme.

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The effect of ion pairs on the thermal stability of D-glyceraldehyde 3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima

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Catalytic properties of thermophilic lactate dehydrogenase and halophilic malate dehydrogenase at high temperature and low water activity

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Lactate dehydrogenase from the extreme thermophile Thermotoga maritima

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The L-lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli

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Tetrameric and octameric lactate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima. Structure and stability of the two active forms.

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Phosphoribosyl anthranilate isomerase from Thermotoga maritima is an extremely stable and active homodimer.

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The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution

1 reference

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Crystal structure of glutamate dehydrogenase from the hyperthermophilic eubacterium Thermotoga maritima at 3.0 A resolution

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Closed structure of phosphoglycerate kinase from Thermotoga maritima reveals the catalytic mechanism and determinants of thermal stability

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Crystal structure at 2.0 A resolution of phosphoribosyl anthranilate isomerase from the hyperthermophile Thermotoga maritima: possible determinants of protein stability

1 reference

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Folding and association of proteins

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From analysis to synthesis: new ligand binding sites on the lactate dehydrogenase framework. Part I.

1 reference

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Protein stability and molecular adaptation to extreme conditions

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Thermal stability and protein structure

1 reference

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Engineering protein thermal stability. Sequence statistics point to residue substitutions in alpha-helices.

1 reference

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Temperature adaptation of lactate dehydrogenase. Structural, functional and genetic aspects

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Protein thermal stability, hydrogen bonds, and ion pairs

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Relevance of sequence statistics for the properties of extremophilic proteins.

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Stability and folding of ultrastable proteins: eye lens crystallins and enzymes from thermophiles.

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Enzyme thermostabilization: the state of the art.

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1 reference

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Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 A resolution

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Structure determination of crystalline lobster D-glyceraldehyde-3-phosphate dehydrogenase

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1 reference

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Structure of Lactate Dehydrogenase at 2.8 Å Resolution

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1 reference

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1 reference

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Structure of the active ternary complex of pig heart lactate dehydrogenase with S-lac-NAD at 2.7 A resolution

1 reference

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1 reference

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1 reference

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Stereochemical basis of heat stability in bacterial ferredoxins and in haemoglobin A2

1 reference

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1 reference

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inferred from DOI database lookup

Hydrogen bonding in globular proteins

1 reference

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based on heuristic

inferred from DOI database lookup

Protein thermal stability: hydrogen bonds or internal packing?

1 reference

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based on heuristic

inferred from DOI database lookup

The nature of the accessible and buried surfaces in proteins

1 reference

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inferred from DOI database lookup

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1 reference

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inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design

1 reference

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based on heuristic

inferred from DOI database lookup

Ion pairs in alpha helices

1 reference

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based on heuristic

inferred from DOI database lookup

Enhanced protein thermostability from designed mutations that interact with alpha-helix dipoles

1 reference

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based on heuristic

inferred from DOI database lookup

Capping and alpha-helix stability

1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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1 reference

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Solvent-accessible surfaces of proteins and nucleic acids

1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Ion-pairs in proteins.

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Arginine residues as stabilizing elements in proteins

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

based on heuristic

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1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

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1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Charge effects on folded and unfolded proteins

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

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inferred from DOI database lookup

Classical electrostatics in biology and chemistry

1 reference

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7 January 2021

based on heuristic

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1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

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1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Strength and co-operativity of contributions of surface salt bridges to protein stability

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

The role of the alpha-helix dipole in protein function and structure

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Structural and genetic analysis of protein stability

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Correlation of IR spectroscopic, heat capacity, diamagnetic susceptibility and enzymatic measurements on lysozyme powder

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

The interpretation of protein structures: Total volume, group volume distributions and packing density

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Hydrophobic bonding and accessible surface area in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Genetic analysis of protein stability and function

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Temperature-sensitive mutations of bacteriophage T4 lysozyme occur at sites with low mobility and low solvent accessibility in the folded protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Hydrophobic stabilization in T4 lysozyme determined directly by multiple substitutions of Ile 3

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Tetrameric triosephosphate isomerase from hyperthermophilic Archaea

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Dissection of the gene of the bifunctional PGK-TIM fusion protein from the hyperthermophilic bacterium Thermotoga maritima: design and characterization of the separate triosephosphate isomerase

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

The CCP4 suite: programs for protein crystallography

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

The molecular replacement method

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Accurate bond and angle parameters for X-ray protein structure refinement

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Conformation of Polypeptides and Proteins

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

ALSCRIPT: a tool to format multiple sequence alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Raster3D Version 2.0. A program for photorealistic molecular graphics

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

Satisfying hydrogen bonding potential in proteins

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Detection, delineation, measurement and display of cavities in macromolecular structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900078-1

7 January 2021

based on heuristic

inferred from DOI database lookup

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1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

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10.1016/S0969-2126(98)00078-1

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