(Q27766373)

English

Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity

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scholarly article

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7 December 2019

Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity (English)

1 reference

Europe PubMed Central

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7 December 2019

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Escherichia coli

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Hiroshi Sakamoto

6

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7 December 2019

7

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J Janin

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7 December 2019

author name string

P Briozzo

1

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7 December 2019

B Golinelli-Pimpaneau

2

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7 December 2019

A M Gilles

3

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7 December 2019

J F Gaucher

4

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7 December 2019

S Burlacu-Miron

5

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7 December 2019

O Bârzu

8

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7 December 2019

publication date

1 December 1998

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7 December 2019

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7 December 2019

6

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7 December 2019

1517-1527

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7 December 2019

12

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7 December 2019

The cmk gene encoding cytidine monophosphate kinase is located in the rpsA operon and is required for normal replication rate in Escherichia coli

1 reference

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Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5A refined at 1.9 A resolution. A model for a catalytic transition state

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Refined structure of porcine cytosolic adenylate kinase at 2.1 A resolution

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Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase

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Refined structure of the complex between guanylate kinase and its substrate GMP at 2·0 Å resolution

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The three-dimensional structure of thymidine kinase from herpes simplex virus type 1.

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Crystal structure of bacteriophage T4 deoxynucleotide kinase with its substrates dGMP and ATP

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Crystal structure of yeast thymidylate kinase complexed with the bisubstrate inhibitor P1-(5'-adenosyl) P5-(5'-thymidyl) pentaphosphate (TP5A) at 2.0 A resolution: implications for catalysis and AZT activation

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Three-dimensional structure of the complex between the mitochondrial matrix adenylate kinase and its substrate AMP

1 reference

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Structure of the complex of yeast adenylate kinase with the inhibitor P1,P5-di(adenosine-5'-)pentaphosphate at 2.6 A resolution

1 reference

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7 January 2021

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Crystal structure of the complex of UMP/CMP kinase from Dictyostelium discoideum and the bisubstrate inhibitor P1-(5'-adenosyl) P5-(5'-uridyl) pentaphosphate (UP5A) and Mg2+ at 2.2 A: implications for water-mediated specificity

1 reference

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7 January 2021

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Structural and catalytic properties of CMP kinase from Bacillus subtilis: a comparative analysis with the homologous enzyme from Escherichia coli.

1 reference

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CMP kinase from Escherichia coli is structurally related to other nucleoside monophosphate kinases.

1 reference

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Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

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Movie of the structural changes during a catalytic cycle of nucleoside monophosphate kinases

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Improved methods for building protein models in electron density maps and the location of errors in these models

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The refined structure of the complex between adenylate kinase from beef heart mitochondrial matrix and its substrate AMP at 1.85 A resolution

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https://api.crossref.org/works/10.1016%2FS0969-2126%2898%2900150-6

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Structures of active conformations of UMP kinase from Dictyostelium discoideum suggest phosphoryl transfer is associative

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7 January 2021

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Structure of thymidylate kinase reveals the cause behind the limiting step in AZT activation

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Basic local alignment search tool

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Solvent content of protein crystals

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The CCP4 suite: programs for protein crystallography

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[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

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Methods used in the structure determination of bovine mitochondrial F1 ATPase

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AMoRe: an automated package for molecular replacement

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Crystallographic R factor refinement by molecular dynamics

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The Protein Data Bank: a computer-based archival file for macromolecular structures

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