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Co-transcriptional degradation by the 5'-3' exonuclease Rat1p mediates quality control of HXK1 mRNP biogenesis in S. cerevisiae
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scholarly article
1 reference
stated in
PubMed
PubMed ID
27124216
retrieved
1 December 2016
title
Co-transcriptional degradation by the 5'-3' exonuclease Rat1p mediates quality control of HXK1 mRNP biogenesis in S. cerevisiae
(English)
1 reference
stated in
PubMed
PubMed ID
27124216
retrieved
1 December 2016
main subject
cell biology
0 references
quality control
0 references
SsRNA exonuclease RAT1 YOR048C
1 reference
stated in
GOA release 2020-03-11
Exosome nuclease subunit RRP6 YOR001W
1 reference
stated in
GOA release 2020-03-11
author name string
Nadège Hervouet-Coste
series ordinal
2
0 references
Christine Mosrin-Huaman
series ordinal
1
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A Rachid Rahmouni
series ordinal
3
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language of work or name
English
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publication date
2 June 2016
0 references
published in
RNA Biology
1 reference
stated in
PubMed
PubMed ID
27124216
retrieved
1 December 2016
volume
13
0 references
page(s)
582-92
0 references
issue
6
0 references
cites work
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Disengaging polymerase: terminating RNA polymerase II transcription in budding yeast
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Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rho-induced aberrant transcripts
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20 March 2017
Identification of a quality-control mechanism for mRNA 5'-end capping
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PubMed Central
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20 March 2017
Gene loops function to maintain transcriptional memory through interaction with the nuclear pore complex
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PubMed Central
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20 March 2017
Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae.
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20 March 2017
Structure and function of the 5′→3′ exoribonuclease Rat1 and its activating partner Rai1
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PubMed Central
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20 March 2017
Endonucleolytic RNA cleavage by a eukaryotic exosome
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PubMed Central
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20 March 2017
The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
1 reference
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PubMed Central
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20 March 2017
The nuclear exosome and adenylation regulate posttranscriptional tethering of yeast GAL genes to the nuclear periphery
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PubMed Central
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20 March 2017
Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination
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PubMed Central
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20 March 2017
Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants
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PubMed Central
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20 March 2017
A single subunit, Dis3, is essentially responsible for yeast exosome core activity
1 reference
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PubMed Central
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20 March 2017
SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope
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PubMed Central
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20 March 2017
The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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20 March 2017
A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes
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PubMed Central
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20 March 2017
Analyzing real-time PCR data by the comparative C(T) method
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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20 March 2017
RNA Polymerase II C-Terminal Domain: Tethering Transcription to Transcript and Template
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PubMed Central
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7 April 2017
Progression through the RNA polymerase II CTD cycle
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PubMed Central
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7 April 2017
Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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7 April 2017
RNA quality control in the nucleus: the Angels' share of RNA.
1 reference
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PubMed Central
reference URL
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29 September 2017
Transcription-associated quality control of mRNP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
retrieved
29 September 2017
Decapping of long noncoding RNAs regulates inducible genes.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
retrieved
29 September 2017
Exonucleolysis is required for nuclear mRNA quality control in yeast THO mutants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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29 September 2017
Biogenesis of mRNPs: integrating different processes in the eukaryotic nucleus
1 reference
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PubMed Central
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29 September 2017
RNA quality control in eukaryotes
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PubMed Central
reference URL
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29 September 2017
Active genes at the nuclear pore complex.
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stated in
PubMed Central
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29 September 2017
Cotranscriptional mRNP assembly: from the DNA to the nuclear pore
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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29 September 2017
Pre-mRNA splicing by complementation with purified human U1, U2, U4/U6 and U5 snRNPs
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PubMed Central
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29 September 2017
Molecular Basis of Transcription-Coupled Pre-mRNA Capping
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PubMed Central
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2 June 2018
Cotranscriptional recruitment of RNA exosome cofactors Rrp47p and Mpp6p and two distinct Trf-Air-Mtr4 polyadenylation (TRAMP) complexes assists the exonuclease Rrp6p in the targeting and degradation of an aberrant messenger ribonucleoprotein particl
1 reference
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PubMed Central
reference URL
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2 June 2018
Cap completion and C-terminal repeat domain kinase recruitment underlie the initiation-elongation transition of RNA polymerase II.
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PubMed Central
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2 June 2018
Co-transcriptional degradation of aberrant pre-mRNA by Xrn2.
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PubMed Central
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2 June 2018
Expression of bacterial Rho factor in yeast identifies new factors involved in the functional interplay between transcription and mRNP biogenesis
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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2 June 2018
3'-end formation signals modulate the association of genes with the nuclear periphery as well as mRNP dot formation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4962804
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2 June 2018
The yeast 5'-3' exonuclease Rat1p functions during transcription elongation by RNA polymerase II.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1080%2F15476286.2016.1181255
retrieved
21 January 2018
Transcriptional response according to strength of calorie restriction in Saccharomyces cerevisiae.
1 reference
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PubMed Central
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27 November 2018
Nuclear pore association confers optimal expression levels for an inducible yeast gene
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1080%2F15476286.2016.1181255
retrieved
21 January 2018
The Rat1p 5′ to 3′ Exonuclease Degrades Telomeric Repeat-Containing RNA and Promotes Telomere Elongation in Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/27124216
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1080/15476286.2016.1181255
1 reference
stated in
PubMed
PubMed ID
27124216
retrieved
1 December 2016
PMCID
4962804
0 references
PubMed ID
27124216
1 reference
stated in
PubMed
PubMed ID
27124216
retrieved
1 December 2016
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