(Q27936507)

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Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rho-induced aberrant transcripts

scientific article published on November 26, 2010

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scholarly article

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PubMed publication ID

1 December 2016

Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rho-induced aberrant transcripts (English)

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PubMed publication ID

1 December 2016

quality control

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1 reference

GOA release 2020-03-11

Nrd1 complex RNA-binding subunit YNL251C

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GOA release 2020-03-11

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

author name string

Romy Honorine

1

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Christine Mosrin-Huaman

2

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Nadège Hervouet-Coste

3

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Domenico Libri

4

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A. Rachid Rahmouni

5

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

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April 2011

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26 November 2010

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

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https://academic.oup.com/nar/article-pdf/39/7/2809/16781780/gkq1192.pdf

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

http://nar.oxfordjournals.org/cgi/content/abstract/39/7/2809

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

http://nar.oxfordjournals.org/cgi/content/full/39/7/2809

online access status

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

http://nar.oxfordjournals.org/cgi/reprint/39/7/2809.pdf

Portable Document Format

online access status

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21113025/pdf/?tool=EBI

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21113025/?tool=EBI

online access status

content deliverer

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

https://europepmc.org/articles/PMC3074134

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Europe PubMed Central

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

https://europepmc.org/articles/PMC3074134?pdf=render

Portable Document Format

online access status

content deliverer

Europe PubMed Central

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113025

4 September 2024

http://academic.oup.com/nar/article-pdf/39/7/2809/16781780/gkq1192.pdf

Portable Document Format

1 reference

10.1093/NAR/GKQ1192

https://api.crossref.org/works/10.1093/NAR/GKQ1192

4 September 2024

Nucleic Acids Research

1 reference

PubMed publication ID

1 December 2016

39

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7

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2809-20

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copyright license

Creative Commons Attribution-NonCommercial 2.5 Generic

4 October 2016

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April 2022 Public Data File from Crossref

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3074134/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

TRAMP complex enhances RNA degradation by the nuclear exosome component Rrp6

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants

1 reference

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20 March 2017

Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Interactions between mRNA export commitment, 3'-end quality control, and nuclear degradation

1 reference

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20 March 2017

Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Quality control of mRNA 3'-end processing is linked to the nuclear exosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

20 March 2017

Transcription termination by nuclear RNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

7 April 2017

Progression through the RNA polymerase II CTD cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

7 April 2017

Phosphorylation and functions of the RNA polymerase II CTD

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

7 April 2017

Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

7 April 2017

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

1 reference

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7 April 2017

"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3074134

29 September 2017

The exosome associates cotranscriptionally with the nascent pre-mRNP through interactions with heterogeneous nuclear ribonucleoproteins

1 reference

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29 September 2017

Nuclear quality control of RNA polymerase II ribonucleoproteins in yeast: tilting the balance to shape the transcriptome

1 reference

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29 September 2017

Cracking the RNA polymerase II CTD code

1 reference

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29 September 2017

Biogenesis of mRNPs: integrating different processes in the eukaryotic nucleus

1 reference

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29 September 2017

RNA quality control in eukaryotes

1 reference

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29 September 2017

Transcription termination factor rho can displace streptavidin from biotinylated RNA.

1 reference

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29 September 2017

Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements

1 reference

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29 September 2017

Distinct pathways for snoRNA and mRNA termination

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29 September 2017

Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance

1 reference

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A nuclear surveillance pathway for mRNAs with defective polyadenylation.

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Formation of export-competent mRNP: escaping nuclear destruction

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Connections between mRNA 3' end processing and transcription termination

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Cotranscriptional mRNP assembly: from the DNA to the nuclear pore

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Genome-wide mRNA surveillance is coupled to mRNA export

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Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

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29 September 2017

PCF11 encodes a third protein component of yeast cleavage and polyadenylation factor I.

1 reference

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29 September 2017

Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae.

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27 November 2018

Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

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Interdependence between Transcription and mRNP Processing and Export, and Its Impact on Genetic Stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/21113025

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Testing the steric exclusion model for hexameric helicases: substrate features that alter RNA-DNA unwinding by the transcription termination factor Rho

1 reference

https://pubmed.ncbi.nlm.nih.gov/21113025

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/21113025

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKQ1192

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PMC publication ID

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PubMed publication ID

1 reference

PubMed publication ID

1 December 2016

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