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Nrd1 complex RNA-binding subunit YNL251C
fungal protein found in Saccharomyces cerevisiae S288c
NRD1
Nrd1 complex RNA-binding subunit
YNL251C
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53617
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
855470
part of
ENTH/VHS
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
RNA-binding domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
Nucleotide-binding alpha-beta plait domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
CID domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Nrd1/Seb1, RNA recognition motif, protein family
1 reference
based on heuristic
inferred from protein domain or family
RNA recognition motif domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53617
encoded by
NRD1
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53617
molecular function
protein domain specific binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
RNA binding
determination method
IDA
IEA
3 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53617
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IEA
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IEA
retrieved
9 May 2019
stated in
Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
transcription regulatory region RNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Recognition of Transcription Termination Signal by the Nuclear Polyadenylated RNA-binding (NAB) 3 Protein
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
nucleic acid binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IEA
protein binding
determination method
IPI
5 references
retrieved
9 May 2019
stated in
Exosome Cofactors Connect Transcription Termination to RNA Processing by Guiding Terminated Transcripts to the Appropriate Exonuclease within the Nuclear Exosome
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IPI
retrieved
9 May 2019
stated in
Proteome survey reveals modularity of the yeast cell machinery
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IPI
retrieved
9 May 2019
stated in
Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IPI
retrieved
9 May 2019
stated in
High-quality binary protein interaction map of the yeast interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IPI
retrieved
9 May 2019
stated in
The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IPI
mRNA binding
determination method
HDA
1 reference
retrieved
9 May 2019
stated in
Global analysis of yeast mRNPs
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
HDA
cell component
Nrd1 complex
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
nucleus
determination method
IBA
IC
IEA
3 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53617
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IEA
retrieved
9 May 2019
stated in
Recognition of Transcription Termination Signal by the Nuclear Polyadenylated RNA-binding (NAB) 3 Protein
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IC
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IBA
biological process
sno(s)RNA 3'-end processing
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
nuclear mRNA surveillance
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment, as revealed by the targeting of Rho-induced aberrant transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
tRNA 3'-end processing
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
The nuclear RNA polymerase II surveillance system targets polymerase III transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
snRNA 3'-end processing
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
CUT catabolic process
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
termination of RNA polymerase II transcription, exosome-dependent
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
mRNA 3'-end processing
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
antisense RNA transcript catabolic process
determination method
IDA
IMP
2 references
retrieved
9 May 2019
stated in
Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IMP
retrieved
9 May 2019
stated in
The Role of Transcription Factors at Antisense-Expressing Gene Pairs in Yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53617
determination method
IDA
mRNA splicing, via spliceosome
determination method
IBA
1 reference
retrieved
16 July 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53617&geneProductId=UniProtKB:P53617
determination method
IBA
has part(s)
RNA recognition motif domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
CID domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
Nrd1/Seb1, RNA recognition motif
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53617
Identifiers
RefSeq protein ID
NP_014148
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855470
UniProt protein ID
P53617
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53617
Ensembl protein ID
YNL251C
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YNL251C
Saccharomyces Genome Database ID
S000005195
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855470
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