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Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p
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scholarly article
1 reference
stated in
PubMed
PubMed ID
10805743
retrieved
1 December 2016
title
Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p
(English)
1 reference
stated in
PubMed
PubMed ID
10805743
retrieved
1 December 2016
main subject
Saccharomyces cerevisiae
0 references
Decapping nuclease YGL246C
1 reference
stated in
GOA release 2020-03-11
SsRNA exonuclease RAT1 YOR048C
1 reference
stated in
GOA release 2020-03-11
author name string
Y Xue
series ordinal
1
0 references
X Bai
series ordinal
2
0 references
I Lee
series ordinal
3
0 references
G Kallstrom
series ordinal
4
0 references
J Ho
series ordinal
5
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J Brown
series ordinal
6
0 references
A Stevens
series ordinal
7
0 references
A W Johnson
series ordinal
8
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language of work or name
English
0 references
publication date
June 2000
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published in
Molecular and Cellular Biology
1 reference
stated in
PubMed
PubMed ID
10805743
retrieved
1 December 2016
volume
20
0 references
page(s)
4006-15
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issue
11
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cites work
The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo
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Functions of the exosome in rRNA, snoRNA and snRNA synthesis
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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
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NMD3 encodes an essential cytoplasmic protein required for stable 60S ribosomal subunits in Saccharomyces cerevisiae
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The human DEVH-box protein Ski2w from the HLA is localized in nucleoli and ribosomes
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Processing of the precursors to small nucleolar RNAs and rRNAs requires common components
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The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
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PubMed Central
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The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
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PubMed Central
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20 March 2017
Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively
1 reference
stated in
PubMed Central
reference URL
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An essential yeast gene with homology to the exonuclease-encoding XRN1/KEM1 gene also encodes a protein with exoribonuclease activity
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PubMed Central
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Yeast virus propagation depends critically on free 60S ribosomal subunit concentration
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20 March 2017
Human helicase gene SKI2W in the HLA class III region exhibits striking structural similarities to the yeast antiviral gene SKI2 and to the human gene KIAA0052: emergence of a new gene family
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20 March 2017
The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site
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20 March 2017
A 5'----3' exoribonuclease of Saccharomyces cerevisiae: size and novel substrate specificity
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PubMed Central
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Improved method for high efficiency transformation of intact yeast cells
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A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains
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20 March 2017
Four ubiquitously expressed genes, RD (D6S45)-SKI2W (SKIV2L)-DOM3Z-RP1 (D6S60E), are present between complement component genes factor B and C4 in the class III region of the HLA
1 reference
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PubMed Central
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A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates
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Cloning and characterization of mouse Dhm2 cDNA, a functional homolog of budding yeast SEP1
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Characterization of cDNA encoding mouse homolog of fission yeast dhp1+ gene: structural and functional conservation
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A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
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Processing of pre-ribosomal RNA in Saccharomyces cerevisiae
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PubMed Central
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Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure
1 reference
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PubMed Central
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Premature translational termination triggers mRNA decapping
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PubMed Central
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Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA
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7 April 2017
Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.
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PubMed Central
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Comparative analyses of the secondary structures of synthetic and intracellular yeast MFA2 mRNAs
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PubMed Central
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29 September 2017
Mutational analysis of exoribonuclease I from Saccharomyces cerevisiae
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities
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reference URL
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29 September 2017
Rme1, a negative regulator of meiosis, is also a positive activator of G1 cyclin gene expression
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reference URL
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29 September 2017
Structure of the yeast TAP1 protein: dependence of transcription activation on the DNA context of the target gene
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
TAP1, a yeast gene that activates the expression of a tRNA gene with a defective internal promoter.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
Synthetic lethality of sep1 (xrn1) ski2 and sep1 (xrn1) ski3 mutants of Saccharomyces cerevisiae is independent of killer virus and suggests a general role for these genes in translation control
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
Fragments of the internal transcribed spacer 1 of pre-rRNA accumulate in Saccharomyces cerevisiae lacking 5'----3' exoribonuclease 1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
End labeling of enzymatically decapped mRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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29 September 2017
Comparison of features of the RNase activity of 5'-exonuclease-1 and 5'-exonuclease-2 of Saccharomyces cerevisiae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
retrieved
2 June 2018
Strand exchange protein 1 from Saccharomyces cerevisiae. A novel multifunctional protein that contains DNA strand exchange and exonuclease activities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85771
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2 June 2018
Purification and characterization of a Saccharomyces cerevisiae exoribonuclease which yields 5'-mononucleotides by a 5' leads to 3' mode of hydrolysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10805743
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
5'-exonuclease-2 of Saccharomyces cerevisiae. Purification and features of ribonuclease activity with comparison to 5'-exonuclease-1
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10805743
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.20.11.4006-4015.2000
0 references
Fatcat ID
release_6e5krfmcv5fpdehm5pbegdeu2e
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/6e5krfmcv5fpdehm5pbegdeu2e
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMCID
85771
0 references
PubMed ID
10805743
1 reference
stated in
PubMed
PubMed ID
10805743
retrieved
1 December 2016
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