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Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork.
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scholarly article
2 references
stated in
PubMed
PubMed ID
16103218
retrieved
1 December 2016
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
title
Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork
(English)
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
main subject
DNA primase subunit PRI1 YIR008C
1 reference
stated in
GOA release 2020-03-11
DNA replication initiation factor CDC45 YLR103C
1 reference
stated in
GOA release 2020-03-11
Chromatin-modulating protein MRC1 YCL061C
1 reference
stated in
GOA release 2020-03-11
Csm3p YMR048W
1 reference
stated in
GOA release 2020-03-11
Tof1p YNL273W
1 reference
stated in
GOA release 2020-03-11
DNA replication protein PSF2 YJL072C
1 reference
stated in
GOA release 2020-03-11
MCM DNA helicase complex subunit MCM4 YPR019W
1 reference
stated in
GOA release 2020-03-11
author
Arturo Calzada
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
Masato T. Kanemaki
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
Avelino Bueno
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
author name string
Ben Hodgson
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
Karim Labib
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
language of work or name
English
0 references
publication date
1 August 2005
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
published in
Genes & Development
2 references
stated in
PubMed
PubMed ID
16103218
retrieved
1 December 2016
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
volume
19
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
page(s)
1905-1919
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
issue
16
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
describes a project that uses
ImageQuant
1 reference
stated in
Europe PubMed Central
retrieved
11 June 2022
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1186190/fullTextXML
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inferred from PubMed Central ID database lookup
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Claspin, a novel protein required for the activation of Chk1 during a DNA replication checkpoint response in Xenopus egg extracts
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The ribonucleotide reductase inhibitor Sml1 is a new target of the Mec1/Rad53 kinase cascade during growth and in response to DNA damage
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Tof1p regulates DNA damage responses during S phase in Saccharomyces cerevisiae
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The DNA replication checkpoint response stabilizes stalled replication forks
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The SAD1/RAD53 protein kinase controls multiple checkpoints and DNA damage-induced transcription in yeast
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The localization of replication origins on ARS plasmids in S. cerevisiae
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swi1- and swi3-dependent and independent replication fork arrest at the ribosomal DNA of Schizosaccharomyces pombe
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29 September 2017
Redundancy, insult-specific sensors and thresholds: unlocking the S-phase checkpoint response
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29 September 2017
Anatomy and dynamics of DNA replication fork movement in yeast telomeric regions
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RNase-sensitive DNA modification(s) initiates S. pombe mating-type switching
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29 September 2017
Enigmatic variations: divergent modes of regulating eukaryotic DNA replication
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29 September 2017
DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1.
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29 September 2017
Mrc1 is a replication fork component whose phosphorylation in response to DNA replication stress activates Rad53.
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29 September 2017
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29 September 2017
A novel ring-like complex of Xenopus proteins essential for the initiation of DNA replication
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29 September 2017
A rotary pumping model for helicase function of MCM proteins at a distance from replication forks.
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29 September 2017
A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage
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29 September 2017
DNA replication forks pause at silent origins near the HML locus in budding yeast
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29 September 2017
Architecture of the replication fork stalled at the 3' end of yeast ribosomal genes
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29 September 2017
Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: shared sequences but independent activities
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29 September 2017
The intrinsic DNA helicase activity of Methanobacterium thermoautotrophicum delta H minichromosome maintenance protein
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29 September 2017
A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase
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29 September 2017
The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity
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29 September 2017
Effects of mutations in DNA repair genes on formation of ribosomal DNA circles and life span in Saccharomyces cerevisiae
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Association of RPA with chromosomal replication origins requires an Mcm protein, and is regulated by Rad53, and cyclin- and Dbf4-dependent kinases
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29 September 2017
Gene conversion plays the major role in controlling the stability of large tandem repeats in yeast
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Requirements for activity of the yeast mitotic recombination hotspot HOT1: RNA polymerase I and multiple cis-acting sequences
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A gene with specific and global effects on recombination of sequences from tandemly repeated genes in Saccharomyces cerevisiae
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29 September 2017
Genes required for initiation and resolution steps of mating-type switching in fission yeast
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29 September 2017
Organization of replication of ribosomal DNA in Saccharomyces cerevisiae
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29 September 2017
Time of replication of ARS elements along yeast chromosome III.
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29 September 2017
Transcription by RNA polymerase I stimulates mitotic recombination in Saccharomyces cerevisiae
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29 September 2017
The arrest of replication forks in the rDNA of yeast occurs independently of transcription
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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29 September 2017
Replication fork blockage by RTS1 at an ectopic site promotes recombination in fission yeast
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
Impairment of replication fork progression mediates RNA polII transcription-associated recombination
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
Analysis of replication intermediates by two-dimensional agarose gel electrophoresis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
A replication fork barrier at the 3' end of yeast ribosomal RNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
Replication forks pause at yeast centromeres
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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2 June 2018
Cis-acting, recombination-stimulating activity in a fragment of the ribosomal DNA of S. cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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20 June 2018
DNA unwinding is an Mcm complex-dependent and ATP hydrolysis-dependent process.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Checkpoint-mediated control of replisome–fork association and signalling in response to replication pausing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Dna2 helicase/nuclease causes replicative fork stalling and double-strand breaks in the ribosomal DNA of Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Saccharomyces cerevisiae RRM3, a 5' to 3' DNA helicase, physically interacts with proliferating cell nuclear antigen
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
retrieved
27 November 2018
ATR homolog Mec1 promotes fork progression, thus averting breaks in replication slow zones.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Genes required for ionizing radiation resistance in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Replication dynamics of the yeast genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
retrieved
27 November 2018
swi1 and swi3 perform imprinting, pausing, and termination of DNA replication in S. pombe.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Orientation of DNA replication establishes mating-type switching pattern in S. pombe.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Chromatin structure and transcriptional activity around the replication forks arrested at the 3' end of the yeast rRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1186190
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27 November 2018
Binding of the replication terminator protein Fob1p to the Ter sites of yeast causes polar fork arrest
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16103218
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Recombination-stimulating sequences in yeast ribosomal DNA correspond to sequences regulating transcription by RNA polymerase I
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16103218
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A programmed strand-specific and modified nick in S. pombe constitutes a novel type of chromosomal imprint
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16103218
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Gross Chromosomal Rearrangements and Elevated Recombination at an Inducible Site-Specific Replication Fork Barrier
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16103218
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GAD.337205
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
PMCID
1186190
1 reference
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
PubMed ID
16103218
2 references
stated in
PubMed
PubMed ID
16103218
retrieved
1 December 2016
stated in
Europe PubMed Central
PMCID
1186190
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16103218%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 January 2020
ResearchGate publication ID
7657863
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