(Q28117100)

4 January 2017

title

Coordination of divalent metal ions in the active site of poly(A)-specific ribonuclease (English)

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Poly(A)-specific ribonuclease

4 January 2017

main subject

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GOA release 2020-03-11

cation binding

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GOA release 2020-03-11

author name string

Yan-Guo Ren

series ordinal

1

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4 January 2017

Leif A. Kirsebom

series ordinal

2

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4 January 2017

Anders Virtanen

series ordinal

3

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4 January 2017

language of work or name

English

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publication date

19 November 2004

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Journal of Biological Chemistry

4 January 2017

published in

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4 January 2017

volume

279

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4 January 2017

issue

47

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4 January 2017

page(s)

48702–48706

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The mechanism and regulation of deadenylation: identification and characterization of Xenopus PARN

4 January 2017

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Poly(A) tail shortening by a mammalian poly(A)-specific 3'-exoribonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

The deadenylating nuclease (DAN) is involved in poly(A) tail removal during the meiotic maturation of Xenopus oocytes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

A 54-kDa fragment of the Poly(A)-specific ribonuclease is an oligomeric, processive, and cap-interacting Poly(A)-specific 3' exonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Cap-dependent deadenylation of mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Interaction between a poly(A)-specific ribonuclease and the 5' cap influences mRNA deadenylation rates in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

The mRNA cap structure stimulates rate of poly(A) removal and amplifies processivity of degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Comparative sequence analysis of ribonucleases HII, III, II PH and D

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Identification of the active site of poly(A)-specific ribonuclease by site-directed mutagenesis and Fe(2+)-mediated cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Cocrystal structure of an editing complex of Klenow fragment with DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Defining the catalytic metal ion interactions in the Tetrahymena ribozyme reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Metal ion catalysis during group II intron self-splicing: parallels with the spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Phosphorothioate modification of RNA for stereochemical and interference analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Active site constraints in the hydrolysis reaction catalyzed by bacterial RNase P: analysis of precursor tRNAs with a single 3'-S-phosphorothiolate internucleotide linkage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

MODIFIED OLIGONUCLEOTIDES: Synthesis and Strategy for Users

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Absolute configuration of the diastereomers of adenosine 5'-O-(1-thiotriphosphate): consequences for the stereochemistry of polymerization by DNA-dependent RNA polymerase from Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Configurationally defined phosphorothioate-containing oligoribonucleotides in the study of the mechanism of cleavage of hammerhead ribozymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

A general two-metal-ion mechanism for catalytic RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Structural elucidation of the binding and inhibitory properties of lanthanide (III) ions at the 3'-5' exonucleolytic active site of the Klenow fragment

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Structural and functional insights provided by crystal structures of DNA polymerases and their substrate complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

Metal ion catalysis during splicing of premessenger RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403858200

21 January 2018

Identifiers

DOI

10.1074/JBC.M403858200

0 references

1 reference