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Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase
scientific journal article
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scholarly article
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
title
Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase
(English)
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
main subject
Recombination activating 1
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stated in
GOA release 2020-03-11
author name string
D. R. Kim
series ordinal
1
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
Y. Dai
series ordinal
2
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
C. L. Mundy
series ordinal
3
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
W. Yang
series ordinal
4
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
M. A. Oettinger
series ordinal
5
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
publication date
1 December 1999
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
published in
Genes & Development
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
volume
13
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
page(s)
3070–3080
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stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
issue
23
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
cites work
Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases
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Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium
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19 March 2017
Assembly of a 12/23 paired signal complex: a critical control point in V(D)J recombination
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The catalytic domain of avian sarcoma virus integrase: conformation of the active-site residues in the presence of divalent cations
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Expression and V(D)J recombination activity of mutated RAG-1 proteins
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19 March 2017
Rch1, a protein that specifically interacts with the RAG-1 recombination-activating protein
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Structural basis for the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism
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DNA polymerases: structural diversity and common mechanisms
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GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences
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7 April 2017
Mutational analysis of RAG1 and RAG2 identifies three catalytic amino acids in RAG1 critical for both cleavage steps of V(D)J recombination
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PubMed Central
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29 September 2017
V(D)J recombination: on the cutting edge
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29 September 2017
A dimer of the lymphoid protein RAG1 recognizes the recombination signal sequence and the complex stably incorporates the high mobility group protein HMG2.
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Binding kinetics and footprinting of TaqI endonuclease: effects of metal cofactors on sequence-specific interactions
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Identification of genes involved in repair of DNA double-strand breaks in mammalian cells.
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29 September 2017
Transposition mediated by RAG1 and RAG2 and its implications for the evolution of the immune system
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29 September 2017
Functional analysis of coordinated cleavage in V(D)J recombination
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29 September 2017
Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases
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29 September 2017
Critical contacts between HIV-1 integrase and viral DNA identified by structure-based analysis and photo-crosslinking
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29 September 2017
Recognition and cleavage of DNA by type-II restriction endonucleases
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29 September 2017
The Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between different gene products.
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29 September 2017
DNA sequence and structure requirements for cleavage of V(D)J recombination signal sequences
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29 September 2017
Retroviral integrases and their cousins
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29 September 2017
Dispensable sequence motifs in the RAG-1 and RAG-2 genes for plasmid V(D)J recombination
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29 September 2017
Analysis of regions of RAG-2 important for V(D)J recombination
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PubMed Central
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29 September 2017
Definition of a core region of RAG-2 that is functional in V(D)J recombination
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29 September 2017
Molecular mechanism of retroviral DNA integration
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29 September 2017
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29 September 2017
Recombining the structures of HIV integrase, RuvC and RNase H.
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PubMed Central
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29 September 2017
Stability constants of magnesium and cadmium complexes of adenine nucleotides and thionucleotides and rate constants for formation and dissociation of magnesium-ATP and magnesium-ADP
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29 September 2017
DNA transposition by the RAG1 and RAG2 proteins: a possible source of oncogenic translocations.
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2 June 2018
Mapping metal ions at the catalytic centres of two intron-encoded endonucleases.
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2 June 2018
Polynucleotidyl transfer reactions in site-specific DNA recombination
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2 June 2018
Recent advances in understanding V(D)J recombination.
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PubMed Central
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2 June 2018
Mapping of catalytic residues in the RNA polymerase active center
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PubMed Central
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2 June 2018
Identification of the amino acid residues involved in an active site of Escherichia coli ribonuclease H by site-directed mutagenesis
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2 June 2018
Biotin tagging deletion analysis of domain limits involved in protein-macromolecular interactions. Mapping the tau binding domain of the DNA polymerase III alpha subunit.
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27 November 2018
Similarities between initiation of V(D)J recombination and retroviral integration.
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27 November 2018
Cleavage at a V(D)J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps.
1 reference
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PubMed Central
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27 November 2018
Site-directed mutagenesis of HIV-1 integrase demonstrates differential effects on integrase functions in vitro
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27 November 2018
Proximity mapping of the Tet repressor-tetracycline-Fe2+ complex by hydrogen peroxide mediated protein cleavage.
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27 November 2018
Affinity cleavage at the putative metal-binding site of pigeon liver malic enzyme by the Fe(2+)-ascorbate system
1 reference
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/10601033
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Isolation and characterization of IS10 transposase separation of function mutants: identification of amino acid residues in transposase that are important for active site function and the stability of transposition intermediates
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10601033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Regions of RAG1 protein critical for V(D)J recombination
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10601033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Ragtime jumping
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10601033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
VDJ recombination: a transposase goes to work
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10601033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
All three residues of the Tn 10 transposase DDE catalytic triad function in divalent metal ion binding
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10601033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GAD.13.23.3070
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Fatcat ID
release_fei46qgolzdn7h2luonsc3fapy
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Fatcat
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https://api.fatcat.wiki/v0/release/fei46qgolzdn7h2luonsc3fapy
retrieved
24 November 2022
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mapped directly with Wikidata item
PMCID
317176
0 references
PubMed ID
10601033
1 reference
stated in
PubMed
PubMed ID
10601033
retrieved
25 January 2017
ResearchGate publication ID
12700449
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