(Q28189849)

Katarzyna Pachulska-Wieczorek

7

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5

object named as

Katarzyna Pachulska-Wieczorek

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Mikołaj Olejniczak

2

object named as

Mikolaj Olejniczak

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Atze T Das

6

object named as

Atze T Das

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author name string

Tadeusz Kulinski

1

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Hendrik Huthoff

3

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Lukasz Bielecki

4

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Ryszard W Adamiak

Journal of Biological Chemistry

8

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language of work or name

English

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publication date

3 October 2003

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published in

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volume

278

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issue

40

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page(s)

38892-901

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cites work

An inhibitor of the Tat/TAR RNA interaction that effectively suppresses HIV-1 replication

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Activation of the AIDS retrovirus promoter by the cellular transcription factor, Sp1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Activity of synthetic peptides from the Tat protein of human immunodeficiency virus type 1

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

RNA recognition by Tat-derived peptides: interaction in the major groove?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Regulation of mRNA accumulation by a human immunodeficiency virus trans-activator protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

HIV-1 TAR RNA enhances the interaction between Tat and cyclin T1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Tat trans-activates the human immunodeficiency virus through a nascent RNA target

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The single-stranded DNA binding protein, Pur-alpha, binds HIV-1 TAR RNA and activates HIV-1 transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Specific binding of RNA polymerase II to the human immunodeficiency virus trans-activating region RNA is regulated by cellular cofactors and Tat

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

tat regulates binding of the human immunodeficiency virus trans-activating region RNA loop-binding protein TRP-185.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Characterization of a human TAR RNA-binding protein that activates the HIV-1 LTR

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Interactions between Tat and TAR and human immunodeficiency virus replication are facilitated by human cyclin T1 but not cyclins T2a or T2b.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

TAR RNA loop: a scaffold for the assembly of a regulatory switch in HIV replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Recruitment of cyclin T1/P-TEFb to an HIV type 1 long terminal repeat promoter proximal RNA target is both necessary and sufficient for full activation of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Enhanced processivity of RNA polymerase II triggered by Tat-induced phosphorylation of its carboxy-terminal domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Structural rearrangements of HIV-1 Tat-responsive RNA upon binding of neomycin B

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The bulge region of HIV-1 TAR RNA binds metal ions in solution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Molecular dynamics studies of the HIV-1 TAR and its complex with argininamide

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

An NMR study of the HIV-1 TAR element hairpin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Modeling and solution structure probing of the HIV-1 TAR stem-loop

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Specific HIV-1 TAR RNA loop sequence and functional groups are required for human cyclin T1-Tat-TAR ternary complex formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

HIV-1 A-rich RNA loop mimics the tRNA anticodon structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Two alternating structures of the HIV-1 leader RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Determination of the minimal amount of Tat activity required for human immunodeficiency virus type 1 replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Probing the environment of lanthanide binding sites in yeast tRNA(Phe) by specific metal-ion-promoted cleavages

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Molecular dynamics and binding specificity analysis of the bovine immunodeficiency virus BIV Tat-TAR complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

A model of the iron responsive element RNA hairpin loop structure determined from NMR and thermodynamic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Iron regulatory element and internal loop/bulge structure for ferritin mRNA studied by cobalt(III) hexammine binding, molecular modeling, and NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

A conserved hairpin structure in Alfamovirus and Bromovirus subgenomic promoters is required for efficient RNA synthesis in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The apical stem-loop of the hepatitis B virus encapsidation signal folds into a stable tri-loop with two underlying pyrimidine bulges

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

A potential RNA drug target in the hepatitis C virus internal ribosomal entry site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

HIV-1 tat trans-activation requires the loop sequence within tar.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Tat and trans-activation-responsive (TAR) RNA-independent induction of HIV-1 long terminal repeat by human and murine cyclin T1 requires Sp1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Two distinct nuclear transcription factors recognize loop and bulge residues of the HIV-1 TAR RNA hairpin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Identification and characterization of a HeLa nuclear protein that specifically binds to the trans-activation-response (TAR) element of human immunodeficiency virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Lupus autoantigen Ku protein binds HIV-1 TAR RNA in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The TAR RNA-binding Protein, TRBP, Stimulates the Expression of TAR-containing RNAsin Vitroandin VivoIndependently of Its Ability to Inhibit the dsRNA-dependent Kinase PKR

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Refolded HIV-1 tat protein protects both bulge and loop nucleotides in TAR RNA from ribonucleolytic cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Characterization of the solution conformations of unbound and Tat peptide-bound forms of HIV-1 TAR RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Selective isotopic enrichment of synthetic RNA: application to the HIV-1 TAR element

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Isotope labeling for 13C relaxation measurements on RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The automated chemical synthesis of long oligoribuncleotides using 2'-O-silylated ribonucleoside 3'-O-phosphoramidites on a controlled-pore glass support: synthesis of a 43-nucleotide sequence similar to the 3'-half molecule of an Escherichia coli fo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

The lonepair triloop: a new motif in RNA structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200

Crystal structure of yeast tRNAAsp

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M301939200