(Q28216346)

English

Mapping functionally important motifs SPF and GGQ of the decoding release factor RF2 to the Escherichia coli ribosome by hydroxyl radical footprinting. Implications for macromolecular mimicry and structural changes in RF2

scientific article (publication date: 25 April 2003)

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scholarly article

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Mapping functionally important motifs SPF and GGQ of the decoding release factor RF2 to the Escherichia coli ribosome by hydroxyl radical footprinting. Implications for macromolecular mimicry and structural changes in RF2 (English)

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Escherichia coli

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based on heuristic

inferred from title

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based on heuristic

inferred from title

4

object named as

Warren P Tate

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author name string

Debbie-Jane G Scarlett

1

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Kim K McCaughan

2

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Daniel N Wilson

3

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language of work or name

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publication date

25 April 2003

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Journal of Biological Chemistry

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278

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17

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15095-104

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Translational termination comes of age.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Release factors and their role as decoding proteins: specificity and fidelity for termination of protein synthesis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Sequence comparison of new prokaryotic and mitochondrial members of the polypeptide chain release factor family predicts a five-domain model for release factor structure

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Salmonella typhimurium prfA mutants defective in release factor 1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Functional domains in the Escherichia coli release factors. Activities of hybrids between RF-1 and RF-2.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The ribosomal binding and peptidyl-tRNA hydrolysis functions of Escherichia coli release factor 2 are linked through residue 246

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Single amino acid substitution in prokaryote polypeptide release factor 2 permits it to terminate translation at all three stop codons

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Functional characterization of yeast mitochondrial release factor 1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A tripeptide 'anticodon' deciphers stop codons in messenger RNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The crystal structure of human eukaryotic release factor eRF1--mechanism of stop codon recognition and peptidyl-tRNA hydrolysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Probing the rRNA environment of ribosomal protein S5 across the subunit interface and inside the 30 S subunit using tethered Fe(II).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The 23 S rRNA environment of ribosomal protein L9 in the 50 S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mapping the ribosomal RNA neighborhood of protein L11 by directed hydroxyl radical probing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Interaction of translation initiation factor 3 with the 30S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mapping the position of translational elongation factor EF-G in the ribosome by directed hydroxyl radical probing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Functional sites of interaction between release factor RF1 and the ribosome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Measurement of protein using bicinchoninic acid

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Peptide chain termination. V. The role of release factors in mRNA terminator codon recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mapping the inside of the ribosome with an RNA helical ruler

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Nucleotides in 16S rRNA protected by the association of 30S and 50S ribosomal subunits

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Direct crosslinking of the antitumor antibiotic sparsomycin, and its derivatives, to A2602 in the peptidyl transferase center of 23S-like rRNA within ribosome-tRNA complexes.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Ribosome-catalyzed peptide-bond formation with an A-site substrate covalently linked to 23S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The path to perdition is paved with protons

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The structural basis of ribosome activity in peptide bond synthesis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Structural insights into peptide bond formation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Macromolecular mimicry

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Structure of the 30S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between '+1' and '+16' on the mRNA, downstream from the decoding site

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutant 16S ribosomal RNA: a codon-specific translational suppressor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutations in RNAs of both ribosomal subunits cause defects in translation termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Recognition of cognate transfer RNA by the 30S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Two regions of the Escherichia coli 16S ribosomal RNA are important for decoding stop signals in polypeptide chain termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

The donor substrate site within the peptidyl transferase loop of 23 S rRNA and its putative interactions with the CCA-end of N-blocked aminoacyl-tRNA(Phe).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutations at nucleotides G2251 and U2585 of 23 S rRNA perturb the peptidyl transferase center of the ribosome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

UGA suppression by a mutant RNA of the large ribosomal subunit

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Crystal structure of a conserved ribosomal protein-RNA complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Limitation of ribosomal protein L11 availability in vivo affects translation termination.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutations in the GTPase center of Escherichia coli 23S rRNA indicate release factor 2-interactive sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Localization of the release factor-2 binding site on 70 S ribosomes by immuno-electron microscopy.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A cryo-electron microscopic study of ribosome-bound termination factor RF2

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Structure of the Escherichia coli ribosomal termination complex with release factor 2

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A Detailed View of a Ribosomal Active Site

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA nonsense suppressors

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Directed hydroxyl radical probing of RNA from iron(II) tethered to proteins in ribonucleoprotein complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Database on the structure of small ribosomal subunit RNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mutations in conserved regions of ribosomal RNAs decrease the productive association of peptide-chain release factors with the ribosome during translation termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Mapping Important Nucleotides in the Peptidyl Transferase Centre of 23 S rRNA using a Random Mutagenesis Approach

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M211024200

21 January 2018

Identifiers

10.1074/JBC.M211024200

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