(Q28220809)

English

Completion and refinement of 3-D homology models with restricted molecular dynamics: application to targets 47, 58, and 111 in the CASP modeling competition and posterior analysis

scientific article (publication date: September 2002)

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scholarly article

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Completion and refinement of 3-D homology models with restricted molecular dynamics: application to targets 47, 58, and 111 in the CASP modeling competition and posterior analysis (English)

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molecular dynamics simulation

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2

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author name string

J A Flohil

1

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H J C Berendsen

3

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language of work or name

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publication date

1 September 2002

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48

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4

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593-604

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The EMBL Nucleotide Sequence Database.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

A large-scale experiment to assess protein structure prediction methods.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Basic local alignment search tool

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Rapid and sensitive sequence comparison with FASTP and FASTA

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Database of homology-derived protein structures and the structural meaning of sequence alignment

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Twilight zone of protein sequence alignments

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

ProMod and Swiss-Model: Internet-based tools for automated comparative protein modelling

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Fast and simple Monte Carlo algorithm for side chain optimization in proteins: application to model building by homology

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Homology modeling by the ICM method

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

The current state of the art in protein structure prediction

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

A brighter future for protein structure prediction

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

2.1 and 1.8 A average C(alpha) RMSD structure predictions on two small proteins, HP-36 and s15.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

WHAT IF: a molecular modeling and drug design program

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

GROMACS: A message-passing parallel molecular dynamics implementation

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

CASP3 comparative modeling evaluation

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Errors in protein structures

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Molecular dynamics with coupling to an external bath

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10105

21 January 2018

Identifiers

10.1002/PROT.10105

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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