(Q28274429)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

An expansive human regulatory lexicon encoded in transcription factor footprints (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Eric Haugen

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Richard Sandstrom

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

32

Michael J MacCoss

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

6

Benjamin Vernot

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

33

Joshua M Akey

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

author name string

Shane Neph

1

1 reference

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12 February 2020

Andrew B Stergachis

3

1 reference

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12 February 2020

Alex P Reynolds

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Robert E Thurman

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Sam John

8

1 reference

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12 February 2020

Audra K Johnson

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Matthew T Maurano

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Richard Humbert

12

1 reference

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12 February 2020

Eric Rynes

13

1 reference

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12 February 2020

Hao Wang

14

1 reference

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12 February 2020

Shinny Vong

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Kristen Lee

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Daniel Bates

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Morgan Diegel

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Vaughn Roach

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Douglas Dunn

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Jun Neri

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Anthony Schafer

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

R Scott Hansen

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Tanya Kutyavin

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Erika Giste

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Molly Weaver

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Theresa Canfield

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Peter Sabo

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Miaohua Zhang

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Gayathri Balasundaram

30

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Rachel Byron

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

M A Bender

34

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Mark Groudine

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Rajinder Kaul

36

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

John A Stamatoyannopoulos

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

language of work or name

English

0 references

publication date

1 September 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

volume

489

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

issue

7414

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

page(s)

83-90

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

12 February 2020

copyright license

start time

1 September 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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20 March 2017

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Human DNA methylomes at base resolution show widespread epigenomic differences

20 March 2017

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20 March 2017

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High-resolution mapping and characterization of open chromatin across the genome

20 March 2017

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20 March 2017

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20 March 2017

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Isolation of the lac repressor

20 March 2017

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

20 March 2017

1 reference

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

20 March 2017

1 reference

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Trajectory of DNA in the RNA polymerase II transcription preinitiation complex

20 March 2017

1 reference

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The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins

20 March 2017

1 reference

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Structure and function of the b/HLH/Z domain of USF

20 March 2017

1 reference

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Cloning of Nrf1, an NF-E2-related transcription factor, by genetic selection in yeast

20 March 2017

1 reference

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The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes

20 March 2017

1 reference

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Structure of serum response factor core bound to DNA

20 March 2017

1 reference

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Mathematical model for studying genetic variation in terms of restriction endonucleases

20 March 2017

1 reference

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DNAase footprinting a simple method for the detection of protein-DNA binding specificity

20 March 2017

1 reference

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Erythroid differentiation in chimaeric mice blocked by a targeted mutation in the gene for transcription factor GATA-1

20 March 2017

1 reference

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A high-resolution map of active promoters in the human genome

20 March 2017

1 reference

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Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome

7 April 2017

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Five intermediate complexes in transcription initiation by RNA polymerase II

7 April 2017

1 reference

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The promoter-specific transcription factor Sp1 binds to upstream sequences in the SV40 early promoter

7 April 2017

1 reference

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Position-independent, high-level expression of the human beta-globin gene in transgenic mice

7 April 2017

1 reference

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Cloning of cDNA for the major DNA-binding protein of the erythroid lineage through expression in mammalian cells

7 April 2017

1 reference

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A census of human transcription factors: function, expression and evolution

7 April 2017

1 reference

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Detection of nonneutral substitution rates on mammalian phylogenies

7 April 2017

1 reference

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Transcription factor AP1 potentiates chromatin accessibility and glucocorticoid receptor binding

24 May 2017

1 reference

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USF and NF-E2 cooperate to regulate the recruitment and activity of RNA polymerase II in the beta-globin gene locus

29 September 2017

1 reference

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Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

29 September 2017

1 reference

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Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs

29 September 2017

1 reference

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Discovery of functional noncoding elements by digital analysis of chromatin structure

29 September 2017

1 reference

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Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays.

29 September 2017

1 reference

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Abundant raw material for cis-regulatory evolution in humans

29 September 2017

1 reference

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Ineffective erythropoiesis in Stat5a(-/-)5b(-/-) mice due to decreased survival of early erythroblasts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

Skeletal muscle determination and differentiation: story of a core regulatory network and its context

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

Effects of DNA methylation on DNA-binding proteins and gene expression.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

Nuclease hypersensitive sites in chromatin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

Transcription from a TATA-less promoter requires a multisubunit TFIID complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

Diversity and complexity in DNA recognition by transcription factors

2 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE11212

A novel role for STAT1 in regulating murine erythropoiesis: deletion of STAT1 results in overall reduction of erythroid progenitors and alters their distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE11212

Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE11212

Simian virus 40 enhancer increases number of RNA polymerase II molecules on linked DNA.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3736582

The accessible chromatin landscape of the human genome

27 November 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE11212

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NATURE11212

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

12 February 2020

1039250372

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PubMed publication ID

22955618

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22955618%20AND%20SRC:MED&resulttype=core&format=json