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Biochemical studies of the mammalian exosome with intact cells
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scholarly article
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title
Biochemical studies of the mammalian exosome with intact cells
(English)
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author name string
Geurt Schilders
series ordinal
1
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Ger J M Pruijn
series ordinal
2
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language of work or name
English
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publication date
2008
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published in
Methods in Enzymology
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volume
448
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page(s)
211-26
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cites work
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of a regulated pathway for nuclear pre-mRNA turnover.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Three novel components of the human exosome
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
AU binding proteins recruit the exosome to degrade ARE-containing mRNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae
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reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
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reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The roles of intersubunit interactions in exosome stability.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Role of pre-rRNA base pairing and 80S complex formation in subnucleolar localization of the U3 snoRNP
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA-quality control by the exosome
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stated in
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reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A protein subunit of human RNase P, Rpp14, and its interacting partner, OIP2, have 3'-->5' exoribonuclease activity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA degradation by the exosome is promoted by a nuclear polyadenylation complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A protein interaction framework for human mRNA degradation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Reconstitution, activities, and structure of the eukaryotic RNA exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Interaction of the U3-55k protein with U3 snoRNA is mediated by the box B/C motif of U3 and the WD repeats of U3-55k
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Protein-protein interactions between human exosome components support the assembly of RNase PH-type subunits into a six-membered PNPase-like ring
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
C1D and hMtr4p associate with the human exosome subunit PM/Scl-100 and are involved in pre-rRNA processing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
MPP6 is an exosome-associated RNA-binding protein involved in 5.8S rRNA maturation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
ARE-mRNA degradation requires the 5'-3' decay pathway.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A new yeast poly(A) polymerase complex involved in RNA quality control
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Constitutive and enhanced expression from the CMV major IE promoter in a defective adenovirus vector
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The human PAF complex coordinates transcription with events downstream of RNA synthesis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902611-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0076-6879(08)02611-6
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PubMed ID
19111178
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