(Q28473387)

1

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Ram Rup Sarkar

2

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Veena K Parnaik

3

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Somdatta Sinha

Creative Commons Attribution 4.0 International

4

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language of work or name

English

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publication date

13 August 2008

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published in

PLOS One

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volume

3

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issue

8

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page(s)

e2972

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copyright license

start time

13 August 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Noise in transcription negative feedback loops: simulation and experimental analysis

19 March 2017

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An excitable gene regulatory circuit induces transient cellular differentiation

19 March 2017

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Delay-induced stochastic oscillations in gene regulation

19 March 2017

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Noise in gene expression: origins, consequences, and control

19 March 2017

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Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations

19 March 2017

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Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion

19 March 2017

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Construction of a genetic toggle switch in Escherichia coli

19 March 2017

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Network motifs in the transcriptional regulation network of Escherichia coli

19 March 2017

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A synthetic oscillatory network of transcriptional regulators

7 April 2017

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Network motifs: theory and experimental approaches

7 April 2017

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Control of stochasticity in eukaryotic gene expression

7 April 2017

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Intrinsic and extrinsic contributions to stochasticity in gene expression

7 April 2017

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Regulation of noise in the expression of a single gene

7 April 2017

1 reference

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Engineering stability in gene networks by autoregulation

7 April 2017

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Stochasticity in gene expression: from theories to phenotypes

7 April 2017

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Noise in eukaryotic gene expression

7 April 2017

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Stochastic mechanisms in gene expression

7 April 2017

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Stochasticity and cell fate

7 April 2017

1 reference

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Positive feedback and noise activate the stringent response regulator rel in mycobacteria

29 September 2017

1 reference

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Oscillations and temporal signalling in cells.

29 September 2017

1 reference

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Noise in gene expression determines cell fate in Bacillus subtilis

29 September 2017

1 reference

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Stochastic fluctuations in metabolic pathways

29 September 2017

1 reference

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Regulatory dynamics of synthetic gene networks with positive feedback

29 September 2017

1 reference

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Dynamical determinants of drug-inducible gene expression in a single bacterium

29 September 2017

1 reference

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Regulated cell-to-cell variation in a cell-fate decision system

29 September 2017

1 reference

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Contributions of low molecule number and chromosomal positioning to stochastic gene expression

29 September 2017

1 reference

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Noise propagation in gene networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Ultrasensitivity and noise propagation in a synthetic transcriptional cascade.

29 September 2017

1 reference

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Tracking operator state fluctuations in gene expression in single cells

29 September 2017

1 reference

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Just-in-time transcription program in metabolic pathways

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Spatiotemporal control of gene expression with pulse-generating networks.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Superfamilies of evolved and designed networks.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Summing up the noise in gene networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

The Coherent Feedforward Loop Serves as a Sign-sensitive Delay Element in Transcription Networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Frequency domain analysis of noise in autoregulated gene circuits.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

The network of time: understanding the molecular circadian system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Control, exploitation and tolerance of intracellular noise

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Negative autoregulation speeds the response times of transcription networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Mathematical modeling of gene networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Fundamentally different logic of gene regulation in eukaryotes and prokaryotes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

It's a noisy business! Genetic regulation at the nanomolar scale

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Sequential repression and derepression of the enzymes for histidine biosynthesis in Salmonella typhimurium

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Modeling the cell division cycle: cdc2 and cyclin interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Global stability in time-delayed single-species dynamics.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

The effect of negative feedback on noise propagation in transcriptional gene networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Propagation of extrinsic perturbation in a negatively auto-regulated pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Multistability in the lactose utilization network of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Oscillatory behavior in enzymatic control processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Complex behaviour of the repressible operon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Gene network shaping of inherent noise spectra.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Response delays and the structure of transcription networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Noise-induced cooperative behavior in a multicell system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

A positive feedback loop promotes transcription surge that jump-starts Salmonella virulence circuit.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Exact stochastic simulation of coupled chemical reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Dynamical behaviour of biological regulatory networks--II. Immunity control in bacteriophage lambda.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2494610

Comparison of classical and autogenous systems of regulation in inducible operons

27 November 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002972

Sequential transcription of the genes of the lactose operon and its regulation by protein synthesis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18698420