(Q28475143)

4

0 references

Eliezer Masliah

10

object named as

Eliezer Masliah

0 references

Susanna L Lamers

1

object named as

Susanna L Lamers

0 references

author name string

Marco Salemi

2

0 references

Derek C Galligan

3

0 references

Gary B Fogel

5

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Sara C Granier

6

0 references

Li Zhao

7

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Joseph N Brown

8

0 references

Alanna Morris

9

0 references

Michael S McGrath

Creative Commons Attribution 4.0 International

11

0 references

language of work or name

English

0 references

publication date

2009

0 references

published in

PLOS One

0 references

volume

4

0 references

issue

3

0 references

page(s)

e5065

0 references

copyright license

start time

31 March 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Apoptotic killing of HIV-1-infected macrophages is subverted by the viral envelope glycoprotein

19 March 2017

1 reference

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Frequent intrapatient recombination between human immunodeficiency virus type 1 R5 and X4 envelopes: implications for coreceptor switch

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients

19 March 2017

1 reference

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The causes and consequences of HIV evolution

19 March 2017

1 reference

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Coalescent estimates of HIV-1 generation time in vivo

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Using CLUSTAL for multiple sequence alignments

19 March 2017

1 reference

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Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection

7 April 2017

1 reference

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Viral dynamics in human immunodeficiency virus type 1 infection

7 April 2017

1 reference

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Neighbor-net: an agglomerative method for the construction of phylogenetic networks

7 April 2017

1 reference

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Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination

7 April 2017

1 reference

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Analyzing the mosaic structure of genes

7 April 2017

1 reference

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Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Phylodynamic analysis of human immunodeficiency virus type 1 in distinct brain compartments provides a model for the neuropathogenesis of AIDS.

7 April 2017

1 reference

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An exploratory algorithm to identify intra-host recombinant viral sequences

9 May 2017

1 reference

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Phylodynamics of HIV-1 in lymphoid and non-lymphoid tissues reveals a central role for the thymus in emergence of CXCR4-using quasispecies

29 September 2017

1 reference

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An exact nonparametric method for inferring mosaic structure in sequence triplets

29 September 2017

1 reference

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Recombination favors the evolution of drug resistance in HIV-1 during antiretroviral therapy

29 September 2017

1 reference

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Human immunodeficiency virus type 1: resistance to nucleoside analogues and replicative capacity in primary human macrophages.

29 September 2017

1 reference

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Endothelial dysfunction in HIV infection

29 September 2017

1 reference

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A simple and robust statistical test for detecting the presence of recombination

29 September 2017

1 reference

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Comparison of the genetic recombination rates of human immunodeficiency virus type 1 in macrophages and T cells

29 September 2017

1 reference

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Pervasive genomic recombination of HIV-1 in vivo

29 September 2017

1 reference

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Dynamics of HIV-1 recombination in its natural target cells

29 September 2017

1 reference

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HIVbase: a PC/Windows-based software offering storage and querying power for locally held HIV-1 genetic, experimental and clinical data

29 September 2017

1 reference

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The non-clonal and transitory nature of HIV in vivo.

29 September 2017

1 reference

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Human immunodeficiency virus type 1 recombination: rate, fidelity, and putative hot spots

29 September 2017

1 reference

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Evaluation of methods for detecting recombination from DNA sequences: computer simulations

29 September 2017

1 reference

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Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences

29 September 2017

1 reference

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Mosaic structure of the human immunodeficiency virus type 1 genome infecting lymphoid cells and the brain: evidence for frequent in vivo recombination events in the evolution of regional populations.

29 September 2017

1 reference

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Retroviral Recombination and Reverse Transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Structure, Replication, and Recombination of Retrovirus Genomes: Some Unifying Hypotheses

29 September 2017

1 reference

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Evidence for a pathogenic determinant in HIV-1 Nef involved in B cell dysfunction in HIV/AIDS.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Recombination: Multiply infected spleen cells in HIV patients

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

The nature of human immunodeficiency virus type 1 strand transfers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Mortality in the highly active antiretroviral therapy era: changing causes of death and disease in the HIV outpatient study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination Breakpoints

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

RDP2: recombination detection and analysis from sequence alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Different sliding window sizes and inappropriate subtype references result in discordant mosaic maps and breakpoint locations of HIV-1 CRFs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

HIV insertions within and proximal to host cell genes are a common finding in tissues containing high levels of HIV DNA and macrophage-associated p24 antigen expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Pronounced lipoatrophy in HIV-infected men receiving HAART for more than 6 years compared with the background population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Prevalence of metabolic syndrome in HIV-infected patients receiving highly active antiretroviral therapy using International Diabetes Foundation and Adult Treatment Panel III criteria: associations with insulin resistance, disturbed body fat compart

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Quantitation of target molecules from polymerase chain reaction-based limiting dilution assays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Automated phylogenetic detection of recombination using a genetic algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005065

Effect of macrophage depletion on viral DNA rebound following antiretroviral therapy in a murine model of AIDS (MAIDS).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Statistical tests for detecting gene conversion.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659430

Macrophages as a source of HIV during opportunistic infections

27 November 2018

1 reference

12 December 2020

Possible emergence of new geminiviruses by frequent recombination

1 reference

12 December 2020

Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

1 reference

12 December 2020

A model for alignment of Env V1 and V2 hypervariable domains from human and simian immunodeficiency viruses.

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0005065

Identifiers

DOI

1 reference

ADS bibcode

2009PLoSO...4.5065L

0 references

1 reference

1 reference

PubMed publication ID

19333384

1 reference