(Q28476223)

3

0 references

Olga Troyanskaya

4

object named as

Olga G Troyanskaya

0 references

author name string

Christopher Y Park

1

0 references

David C Hess

PLOS Computational Biology

2

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language of work or name

English

0 references

publication date

24 November 2010

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published in

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volume

6

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page(s)

e1001009

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issue

11

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copyright license

Creative Commons Attribution 4.0 International

start time

24 November 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Involvement of specific COPI subunits in protein sorting from the late endosome to the vacuole in yeast

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STRING 7--recent developments in the integration and prediction of protein interactions

19 March 2017

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Discovery of biological networks from diverse functional genomic data

19 March 2017

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19 March 2017

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mTOR and S6K1 mediate assembly of the translation preinitiation complex through dynamic protein interchange and ordered phosphorylation events

19 March 2017

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Core transcriptional regulatory circuitry in human embryonic stem cells

19 March 2017

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The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis

19 March 2017

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Predicting co-complexed protein pairs using genomic and proteomic data integration

19 March 2017

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Global mapping of the yeast genetic interaction network

19 March 2017

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Network biology: understanding the cell's functional organization

19 March 2017

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The Gene Ontology (GO) database and informatics resource

19 March 2017

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Global analysis of protein localization in budding yeast

19 March 2017

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Structure and function of the feed-forward loop network motif

19 March 2017

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Transcriptional regulatory networks in Saccharomyces cerevisiae

19 March 2017

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Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

19 March 2017

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Systematic genetic analysis with ordered arrays of yeast deletion mutants

19 March 2017

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Missing value estimation methods for DNA microarrays

19 March 2017

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Gene ontology: tool for the unification of biology

19 March 2017

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KEGG: kyoto encyclopedia of genes and genomes

19 March 2017

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19 March 2017

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Collective dynamics of 'small-world' networks

19 March 2017

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Assembly of the ER to Golgi SNARE complex requires Uso1p

19 March 2017

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A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

19 March 2017

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SNAREs--engines for membrane fusion

7 April 2017

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TRANSFAC: transcriptional regulation, from patterns to profiles

7 April 2017

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Network motifs: simple building blocks of complex networks

7 April 2017

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Network motifs in the transcriptional regulation network of Escherichia coli

7 April 2017

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Network motifs: theory and experimental approaches

7 April 2017

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SGD: Saccharomyces Genome Database

7 April 2017

1 reference

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Causal protein-signaling networks derived from multiparameter single-cell data

7 April 2017

1 reference

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The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

7 April 2017

1 reference

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Proteomic analysis of post-translational modifications

7 April 2017

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Modular composition predicts kinase/substrate interactions.

7 April 2017

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Snf1 controls the activity of adr1 through dephosphorylation of Ser230.

29 September 2017

1 reference

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Exploring the human genome with functional maps

29 September 2017

1 reference

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Global networks of functional coupling in eukaryotes from comprehensive data integration

29 September 2017

1 reference

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Petabyte-scale innovations at the European Nucleotide Archive

29 September 2017

1 reference

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Developing a protein-interactions ontology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Predicting gene function in a hierarchical context with an ensemble of classifiers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

The Sleipnir library for computational functional genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

The Predikin webserver: improved prediction of protein kinase peptide specificity using structural information

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Predicting co-complexed protein pairs from heterogeneous data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

GraphCrunch: a tool for large network analyses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Finding function: evaluation methods for functional genomic data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Choosing negative examples for the prediction of protein-protein interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Evaluation of different biological data and computational classification methods for use in protein interaction prediction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Hierarchical multi-label prediction of gene function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Kernel methods for predicting protein-protein interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Sense and sensibility: nutritional response and signal integration in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Combining biological networks to predict genetic interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Inferring cellular networks using probabilistic graphical models

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Flux coupling analysis of genome-scale metabolic network reconstructions.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Using graphical models and genomic expression data to statistically validate models of genetic regulatory networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

ARF is required for maintenance of yeast Golgi and endosome structure and function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Vps1p, a member of the dynamin GTPase family, is necessary for Golgi membrane protein retention in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Repression versus activation in the control of gene transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Defining components required for transport from the ER to the Golgi complex in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Multiple Ca2+/calmodulin-dependent protein kinase genes in a unicellular eukaryote

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

Comprehensive phenotypic analysis for identification of genes affecting growth under ethanol stress in Saccharomyces cerevisiae

29 September 2017

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

Biological network comparison using graphlet degree distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

Comment on "Network motifs: simple building blocks of complex networks" and "Superfamilies of evolved and designed networks".

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

FANMOD: a tool for fast network motif detection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

Graphical Models for Associations between Variables, some of which are Qualitative and some Quantitative

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

Probabilistic model of the human protein-protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1001009

Coordinate regulation of glycogen metabolism in the yeast Saccharomyces cerevisiae. Induction of glycogen branching enzyme.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991250

A probabilistic functional network of yeast genes

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21124865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1001009

1 reference

journals/ploscb/ParkHHT10

2313361

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

2313361

1 reference

1 reference

1 reference