(Q28477326)

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Identification of Plasmodium vivax proteins with potential role in invasion using sequence redundancy reduction and profile hidden Markov models

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scholarly article

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Identification of Plasmodium vivax proteins with potential role in invasion using sequence redundancy reduction and profile hidden Markov models (English)

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Plasmodium vivax

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Manuel-Alfonso Patarroyo

7

object named as

Manuel A Patarroyo

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Manuel-Elkin Patarroyo

6

object named as

Manuel E Patarroyo

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author name string

Daniel Restrepo-Montoya

1

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David Becerra

2

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Juan G Carvajal-Patiño

3

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Alvaro Mongui

4

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Luis F Niño

5

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publication date

2011

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full work available at URL

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3184965

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21 March 2022

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6

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10

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e25189

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copyright license

Creative Commons Attribution 4.0 International

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3 April 2022

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Advances and challenges in malaria vaccine development

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19 March 2017

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19 March 2017

The Pfam protein families database

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19 March 2017

Identification of rhoptry trafficking determinants and evidence for a novel sorting mechanism in the malaria parasite Plasmodium falciparum

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19 March 2017

InterPro: the integrative protein signature database

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19 March 2017

Comparative genomics of the neglected human malaria parasite Plasmodium vivax

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19 March 2017

Clustal W and Clustal X version 2.0

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19 March 2017

BaCelLo: a balanced subcellular localization predictor

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19 March 2017

Identification and stoichiometry of glycosylphosphatidylinositol-anchored membrane proteins of the human malaria parasite Plasmodium falciparum

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19 March 2017

Improved prediction of signal peptides: SignalP 3.0

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Feature-based prediction of non-classical and leaderless protein secretion

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19 March 2017

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19 March 2017

Western blot diagnosis of vivax malaria with multiple stage-specific antigens of the parasite

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19 March 2017

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19 March 2017

Profile hidden Markov models

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19 March 2017

The RON2-AMA1 interaction is a critical step in moving junction-dependent invasion by apicomplexan parasites

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19 March 2017

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

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7 April 2017

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

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7 April 2017

A new generation of homology search tools based on probabilistic inference

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7 April 2017

PISCES: a protein sequence culling server

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7 April 2017

Hidden Markov models for detecting remote protein homologies

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7 April 2017

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7 April 2017

PlasmoDB: a functional genomic database for malaria parasites

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7 April 2017

Carotenoid biosynthesis in intraerythrocytic stages of Plasmodium falciparum

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24 May 2017

Distinct protein classes including novel merozoite surface antigens in Raft-like membranes of Plasmodium falciparum

1 reference

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24 May 2017

Determination of the Plasmodium vivax schizont stage proteome

1 reference

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29 September 2017

B cell epitope mapping and characterization of naturally acquired antibodies to the Plasmodium vivax merozoite surface protein-3α (PvMSP-3α) in malaria exposed individuals from Brazilian Amazon

1 reference

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29 September 2017

EuPathDomains: the divergent domain database for eukaryotic pathogens.

1 reference

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29 September 2017

Genome-wide survey and evolutionary analysis of trypsin proteases in apicomplexan parasites.

1 reference

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29 September 2017

In silico and biological survey of transcription-associated proteins implicated in the transcriptional machinery during the erythrocytic development of Plasmodium falciparum.

1 reference

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29 September 2017

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1 reference

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29 September 2017

Inconsistencies of genome annotations in apicomplexan parasites revealed by 5'-end-one-pass and full-length sequences of oligo-capped cDNAs

1 reference

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29 September 2017

ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins.

1 reference

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1 reference

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29 September 2017

The transcriptome of Plasmodium vivax reveals divergence and diversity of transcriptional regulation in malaria parasites

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Intimate molecular interactions of P. falciparum merozoite proteins involved in invasion of red blood cells and their implications for vaccine design

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Protein trafficking to apical organelles of malaria parasites - building an invasion machine

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29 September 2017

Mining the malaria transcriptome.

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29 September 2017

Plasmodium vivax merozoite surface proteins-3beta and-3gamma share structural similarities with P. vivax merozoite surface protein-3alpha and define a new gene family

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29 September 2017

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2 June 2018

Secreted protein prediction system combining CJ-SPHMM, TMHMM, and PSORT.

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2 June 2018

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2 June 2018

A reticulocyte-binding protein complex of plasmodium vivax merozoites

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2 June 2018

Immunoproteomics profiling of blood stage Plasmodium vivax infection by high-throughput screening assays

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

Plasmodium vivax: immunological properties of tryptophan-rich antigens PvTRAg 35.2 and PvTRAg 80.6.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

Immunogenicity and protection-inducing ability of recombinant Plasmodium vivax rhoptry-associated protein 2 in Aotus monkeys: a potential vaccine candidate.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

Splenectomised and spleen intact Aotus monkeys' immune response to Plasmodium vivax MSP-1 protein fragments and their high activity binding peptides.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

PvRON2, a new Plasmodium vivax rhoptry neck antigen

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

The Plasmodium vivax rhoptry-associated protein 1.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

Identification of protein complexes in detergent-resistant membranes of Plasmodium falciparum schizonts

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025189

21 January 2018

MAAP: malarial adhesins and adhesin-like proteins predictor

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21 January 2018

Progress in in silico functional genomics: the malaria Metabolic Pathways database

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21 January 2018

An HMM posterior decoder for sequence feature prediction that includes homology information

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21 January 2018

Identification and polymorphism of Plasmodium vivax RBP-1 peptides which bind specifically to reticulocytes

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27 November 2018

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10.1371/JOURNAL.PONE.0025189

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2011PLoSO...625189R

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