(Q28486237)

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Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the comparative toxicogenomics database

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the comparative toxicogenomics database (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

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Carolyn J Mattingly

9

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Thomas C. Wiegers

2

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Thomas C Wiegers

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Allan Peter Davis

1

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Allan Peter Davis

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

7

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Daniela Sciaky

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Europe PubMed Central

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29 February 2020

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Robin J Johnson

3

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Europe PubMed Central

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29 February 2020

Jean M Lay

4

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Europe PubMed Central

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29 February 2020

Kelley Lennon-Hopkins

5

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Cynthia Saraceni-Richards

6

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Cynthia Grondin Murphy

8

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Europe PubMed Central

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29 February 2020

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17 April 2013

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Europe PubMed Central

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29 February 2020

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

8

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

4

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Europe PubMed Central

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29 February 2020

e58201

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Europe PubMed Central

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29 February 2020

copyright license

Creative Commons Attribution 4.0 International

17 April 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Text mining for the biocuration workflow

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Biocurators and biocuration: surveying the 21st century challenges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Database resources of the National Center for Biotechnology Information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

big data: The future of biocuration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Biocurators: contributors to the world of science

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Facts from text--is text mining ready to deliver?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Textpresso: an ontology-based information retrieval and extraction system for biological literature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

19 March 2017

Advances in metal-induced oxidative stress and human disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

7 April 2017

Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

7 April 2017

Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Collaborative biocuration--text-mining development task for document prioritization for curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Automatic categorization of diverse experimental information in the bioscience literature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

WormBase 2012: more genomes, more data, new website

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

The importance of biological databases in biological discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

The Comparative Toxicogenomics Database: update 2011.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

A MOD(ern) perspective on literature curation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Integrating text mining into the MGI biocuration workflow

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Cascaded classifiers for confidence-based chemical named entity recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

Manual curation is not sufficient for annotation of genomic databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3629079

29 September 2017

The Comparative Toxicogenomics Database: update 2013.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058201

21 January 2018

Identifiers

10.1371/JOURNAL.PONE.0058201

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

2013PLoSO...858201D

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23613709%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

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