(Q28541570)

2

0 references

Shahid Uddin

3

0 references

Jose Casas-Finet

4

0 references

Donald J Jacobs

5

0 references

Dennis R Livesay

Creative Commons Attribution 4.0 International

6

0 references

language of work or name

English

0 references

publication date

2014

0 references

published in

PLOS One

0 references

volume

9

0 references

issue

3

0 references

page(s)

e92870

0 references

copyright license

start time

26 March 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Insights into protein aggregation by NMR characterization of insoluble SH3 mutants solubilized in salt-free water

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Structural understanding of stabilization patterns in engineered bispecific Ig-like antibody molecules

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Critical contribution of VH-VL interaction to reshaping of an antibody: The case of humanization of anti-lysozyme antibody, HyHEL-10

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VL:VH domain rotations in engineered antibodies: crystal structures of the Fab fragments from two murine antitumor antibodies and their engineered human constructs

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Variations within class-A β-lactamase physiochemical properties reflect evolutionary and environmental patterns, but not antibiotic specificity

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

29 September 2017

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Key stabilizing elements of protein structure identified through pressure and temperature perturbation of its hydrogen bond network

29 September 2017

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Changes in Lysozyme Flexibility upon Mutation Are Frequent, Large and Long-Ranged

29 September 2017

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A critical evaluation of correlated mutation algorithms and coevolution within allosteric mechanisms

29 September 2017

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Ensemble properties of network rigidity reveal allosteric mechanisms

29 September 2017

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Nonadditivity in conformational entropy upon molecular rigidification reveals a universal mechanism affecting folding cooperativity

29 September 2017

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Allosteric response is both conserved and variable across three CheY orthologs

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Predicting the Melting Point of Human C-Type Lysozyme Mutants

29 September 2017

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Stability engineering of scFvs for the development of bispecific and multivalent antibodies

29 September 2017

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Increasing protein stability: importance of DeltaC(p) and the denatured state

29 September 2017

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Helix/coil nucleation: a local response to global demands.

29 September 2017

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Stability effects of mutations and protein evolvability

29 September 2017

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The complex inter-relationships between protein flexibility and stability

29 September 2017

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New insight into long-range nonadditivity within protein double-mutant cycles

29 September 2017

1 reference

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Antibody evolution constrains conformational heterogeneity by tailoring protein dynamics

29 September 2017

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Elucidating quantitative stability/flexibility relationships within thioredoxin and its fragments using a distance constraint model

29 September 2017

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Do all backbone polar groups in proteins form hydrogen bonds?

29 September 2017

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Elucidating protein thermodynamics from the three-dimensional structure of the native state using network rigidity

29 September 2017

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A flexible approach for understanding protein stability.

29 September 2017

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29 September 2017

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Selection of mutations for increased protein stability

29 September 2017

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Review: Protein function at thermal extremes: balancing stability and flexibility

29 September 2017

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Kabat Database and its applications: future directions

29 September 2017

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Effect of amino acid substitutions on conformational stability of a protein

29 September 2017

1 reference

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Proteins under extreme physical conditions

29 September 2017

1 reference

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The importance of being flexible

29 September 2017

1 reference

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Thermodynamic stability and flexibility characteristics of antibody fragment complexes

29 September 2017

1 reference

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Unifying mechanical and thermodynamic descriptions across the thioredoxin protein family.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3966838

Hydrogen bond networks determine emergent mechanical and thermodynamic properties across a protein family

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3966838

Increased rigidity of eglin c at acidic pH: evidence from NMR spin relaxation and MD simulations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3966838

Flexibility and ligand exchange in a buried cavity mutant of T4 lysozyme studied by multinuclear NMR.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3966838

A thermodynamic comparison of mesophilic and thermophilic ribonucleases H.

3 June 2018

1 reference

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Win some, lose some: enthalpy-entropy compensation in weak intermolecular interactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3966838

Protein dynamics: dancing on an ever-changing free energy stage

3 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Thermostability in rubredoxin and its relationship to mechanical rigidity

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Protein rigidity and thermophilic adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

15N NMR relaxation studies of Y14F mutant of ketosteroid isomerase: the influence of mutation on backbone mobility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Effects of the N2144S mutation on backbone dynamics of a TB-cbEGF domain pair from human fibrillin-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Protein flexibility predictions using graph theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Energy-based analysis and prediction of the orientation between light- and heavy-chain antibody variable domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Statistical clustering techniques for the analysis of long molecular dynamics trajectories: analysis of 2.2-ns trajectories of YPGDV.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Efficient and robust analysis of biomacromolecular flexibility using ensembles of network topologies based on fuzzy noncovalent constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0092870

Maturation of an antibody response is governed by modulations in flexibility of the antigen-combining site

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24671209

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Generic rigidity percolation: The pebble game

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24671209

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

NMR relaxation studies of the role of conformational entropy in protein stability and ligand binding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24671209

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0092870

1 reference

ADS bibcode

2014PLoSO...992870L

0 references

1 reference

1 reference

PubMed publication ID

24671209

1 reference