(Q28542589)

1

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Rui Yamaguchi

2

0 references

Masao Nagasaki

3

0 references

Seiya Imoto

Creative Commons Attribution 4.0 International

5

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language of work or name

English

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publication date

2014

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published in

PLOS One

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volume

9

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issue

8

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page(s)

e105942

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copyright license

start time

27 August 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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A nucleoprotein complex containing Sp1, C/EBP beta, and HMGI-Y controls human insulin receptor gene transcription

19 March 2017

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Using Bayesian networks to analyze expression data

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Joint Bayesian inference of condition-specific miRNA and transcription factor activities from combined gene and microRNA expression data

29 September 2017

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Inferring dynamic gene networks under varying conditions for transcriptomic network comparison.

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Inferring dynamic genetic networks with low order independencies

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State-space approach with the maximum likelihood principle to identify the system generating time-course gene expression data of yeast

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Information-theoretic inference of large transcriptional regulatory networks.

29 September 2017

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Mathematical modeling of corticosteroid pharmacogenomics in rat muscle following acute and chronic methylprednisolone dosing

29 September 2017

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From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data

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Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data.

29 September 2017

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Bayesian model-based inference of transcription factor activity

29 September 2017

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Ranked prediction of p53 targets using hidden variable dynamic modeling

29 September 2017

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Bayesian sparse hidden components analysis for transcription regulation networks

29 September 2017

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Temporal profiling of the transcriptional basis for the development of corticosteroid-induced insulin resistance in rat muscle

29 September 2017

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Dynamic Bayesian network and nonparametric regression for nonlinear modeling of gene networks from time series gene expression data

29 September 2017

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29 September 2017

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Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.

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Modeling T-cell activation using gene expression profiling and state-space models

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Large-scale learning of combinatorial transcriptional dynamics from gene expression

21 January 2018

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Inferring epigenetic and transcriptional regulation during blood cell development with a mixture of sparse linear models

21 January 2018

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Identification of feedback loops in neural networks based on multi-step Granger causality

21 January 2018

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An empirical Bayes approach to inferring large-scale gene association networks

21 January 2018

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Generating realistic in silico gene networks for performance assessment of reverse engineering methods

21 January 2018

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Modeling of corticosteroid pharmacogenomics in rat liver using gene microarrays

21 January 2018

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A stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae

21 January 2018

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A New Approach to Linear Filtering and Prediction Problems

21 January 2018

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New extension of the Kalman filter to nonlinear systems

21 January 2018

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State and parameter estimation of the heat shock response system using Kalman and particle filters

21 January 2018

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Estimating the Dimension of a Model

21 January 2018

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Unscented Filtering and Nonlinear Estimation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0105942

21 January 2018

Least angle regression

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0105942

A state space representation of VAR models with sparse learning for dynamic gene networks

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146587

Parameter estimation of in silico biological pathways with particle filtering towards a petascale computing

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146587

Estimation of genetic networks and functional structures between genes by using Bayesian networks and nonparametric regression.

27 November 2018

1 reference

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ITFP: an integrated platform of mammalian transcription factors

27 November 2018

1 reference

PubMed

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inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SiGN-SSM: open source parallel software for estimating gene networks with state space models

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25162401

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power-law approximation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25162401